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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Brown-vialetto-van laere syndrome Esophageal squamous cell carcinoma
1 gene
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1 of 1 corroborated by 2+ sources
SLC52A3(6)
0.008 0.500 1.67e-2 1.83e-2 ✓ sig. —
Autoinflammatory syndrome Proteasome associated autoinflammatory syndrome
1 gene
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1 of 1 corroborated by 2+ sources
PSMB8(6)
0.023 0.143 1.67e-2 1.83e-2 ✓ sig. —
psychomotor regression-oculomotor apraxia-movement disorder-nephropathy syndrome Tourette syndrome
1 gene
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1 of 1 corroborated by 2+ sources
SLC30A9(2)
0.004 1.000 1.68e-2 1.84e-2 ✓ sig. —
Diets-jongmans syndrome Tourette syndrome
1 gene
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1 of 1 corroborated by 2+ sources
KDM3B(5)
0.004 1.000 1.68e-2 1.84e-2 ✓ sig. —
Early-onset distal myopathy Tourette syndrome
1 gene
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1 of 1 corroborated by 2+ sources
KLHL9(2)
0.004 1.000 1.68e-2 1.84e-2 ✓ sig. Cluster 69 →
Amaurosis hypertrichosis Tourette syndrome
1 gene
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1 of 1 corroborated by 2+ sources
CNNM4(3)
0.004 1.000 1.68e-2 1.84e-2 ✓ sig. —
Hypertryptophanemia Tourette syndrome
1 gene
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1 of 1 corroborated by 2+ sources
TDO2(6)
0.004 1.000 1.68e-2 1.84e-2 ✓ sig. —
Birk-landau-perez syndrome Tourette syndrome
1 gene
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1 of 1 corroborated by 2+ sources
SLC30A9(3)
0.004 1.000 1.68e-2 1.84e-2 ✓ sig. —
cardiomyopathy, dilated, 2f Tourette syndrome
1 gene
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1 of 1 corroborated by 2+ sources
BAG5(2)
0.004 1.000 1.68e-2 1.84e-2 ✓ sig. Cluster 69 →
Intellectual developmental disorder seizures behavioral Tourette syndrome
1 gene
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1 of 1 corroborated by 2+ sources
ALG14(4)
0.004 1.000 1.68e-2 1.84e-2 ✓ sig. —
jalili syndrome Tourette syndrome
1 gene
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1 of 1 corroborated by 2+ sources
CNNM4(2)
0.004 1.000 1.68e-2 1.84e-2 ✓ sig. —
KIZ-related retinopathy Tourette syndrome
1 gene
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1 of 1 corroborated by 2+ sources
KIZ(2)
0.004 1.000 1.68e-2 1.84e-2 ✓ sig. —
neurodevelopmental disorder with cardiomyopathy, spasticity, and brain abnormalities Tourette syndrome
1 gene
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1 of 1 corroborated by 2+ sources
SHMT2(2)
0.004 1.000 1.68e-2 1.84e-2 ✓ sig. Cluster 69 →
Cancer Essential pentosuria
1 gene
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1 of 1 corroborated by 2+ sources
DCXR(2)
0.004 1.000 1.70e-2 1.86e-2 ✓ sig. Cluster 20 →
Cancer immune dysregulation, autoimmunity, and autoinflammation
1 gene
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1 of 1 corroborated by 2+ sources
PLCG1(2)
0.004 1.000 1.70e-2 1.86e-2 ✓ sig. —
Cancer immunodeficiency-centromeric instability-facial anomalies syndrome 3
1 gene
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1 of 1 corroborated by 2+ sources
CDCA7(2)
0.004 1.000 1.70e-2 1.86e-2 ✓ sig. —
Cancer Laryngeal hypoplasia
1 gene
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1 of 1 corroborated by 2+ sources
FOXP4(2)
0.004 1.000 1.70e-2 1.86e-2 ✓ sig. —
Cancer thrombocytopenia 2
1 gene
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1 of 1 corroborated by 2+ sources
ANKRD26(2)
0.004 1.000 1.70e-2 1.86e-2 ✓ sig. —
Cancer snijders blok-campeau syndrome
1 gene
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1 of 1 corroborated by 2+ sources
CHD3(2)
0.004 1.000 1.70e-2 1.86e-2 ✓ sig. —
Chromosome y microdeletion syndrome Testicular azoospermia
1 gene
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1 of 1 corroborated by 2+ sources
DDX3Y(2)
0.024 0.125 1.70e-2 1.87e-2 ✓ sig. —
Charcot-marie-tooth disease Congenital cataract facial dysmorphism neuropathy syndrome
1 gene
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1 of 1 corroborated by 2+ sources
CTDP1(6)
0.007 0.500 1.71e-2 1.87e-2 ✓ sig. —
Endometrial neoplasms Toe syndactyly-telecanthus-anogenital and renal malformations syndrome
1 gene
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1 of 1 corroborated by 2+ sources
STAR(2)
0.007 0.500 1.71e-2 1.87e-2 ✓ sig. —
Congenital stromal corneal dystrophy Endometrial neoplasms
1 gene
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1 of 1 corroborated by 2+ sources
DCN(4)
0.007 0.500 1.71e-2 1.87e-2 ✓ sig. —
Corticosteroid-binding globulin deficiency Liver cirrhosis
1 gene
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1 of 1 corroborated by 2+ sources
0.004 1.000 1.71e-2 1.88e-2 ✓ sig. —
Liver cirrhosis Mineralocortocoid excess
1 gene
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1 of 1 corroborated by 2+ sources
HSD11B2(7)
0.004 1.000 1.71e-2 1.88e-2 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.