Gene Gene information from NCBI Gene database.
Entrez ID 5696
Gene name Proteasome 20S subunit beta 8
Gene symbol PSMB8
Synonyms (NCBI Gene)
ALDDD6S216D6S216EJMPLMP7NKJOPRAAS1PSMB5iRING10
Chromosome 6
Chromosome location 6p21.32
Summary The proteasome is a multicatalytic proteinase complex with a highly ordered ring-shaped 20S core structure. The core structure is composed of 4 rings of 28 non-identical subunits; 2 rings are composed of 7 alpha subunits and 2 rings are composed of 7 beta
SNPs SNP information provided by dbSNP.
1
SNP ID Visualize variation Clinical significance Consequence
rs387906680 C>A,T Pathogenic Missense variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
3
miRTarBase ID miRNA Experiments Reference
MIRT029309 hsa-miR-26b-5p Microarray 19088304
MIRT733492 hsa-miR-451a qRT-PCRWestern blotting 34112884
MIRT733492 hsa-miR-451a qRT-PCR 32478410
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
31
GO ID Ontology Definition Evidence Reference
GO:0000502 Component Proteasome complex IDA 26524591
GO:0000502 Component Proteasome complex IEA
GO:0000502 Component Proteasome complex TAS 8666937
GO:0002376 Process Immune system process IEA
GO:0004175 Function Endopeptidase activity IBA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
177046 9545 ENSG00000204264
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P28062
Protein name Proteasome subunit beta type-8 (EC 3.4.25.1) (Low molecular mass protein 7) (Macropain subunit C13) (Multicatalytic endopeptidase complex subunit C13) (Proteasome component C13) (Proteasome subunit beta-5i) (Really interesting new gene 10 protein)
Protein function The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent pr
PDB 5L5A , 5L5B , 5L5D , 5L5E , 5L5F , 5L5H , 5L5I , 5L5J , 5L5O , 5L5P , 5L5Q , 5L5R , 5L5S , 5L5T , 5L5U , 5L5V , 5LTT , 5M2B , 6AVO , 6E5B , 7AWE , 7B12
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00227 Proteasome 69 251 Proteasome subunit Domain
Sequence
Sequence length 276
Interactions View interactions
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
29
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Autoinflammatory syndrome Likely pathogenic; Pathogenic rs2127377117 RCV002264415
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Proteasome-associated autoinflammatory syndrome 1 Likely pathogenic; Pathogenic rs763314828, rs895985294, rs1359687163, rs387906680, rs146254972, rs1554239543, rs748082671, rs374929612 RCV003989259
RCV004515817
RCV004515818
RCV000022739
RCV000022741
View all (3 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
PROTEASOME-ASSOCIATED AUTOINFLAMMATORY SYNDROME 1, DIGENIC Pathogenic rs748082671 RCV000663373
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Proteosome-associated autoinflammatory syndrome Likely pathogenic; Pathogenic rs2127377117, rs2483095040, rs1582609458, rs2483096056, rs2483087076, rs1312431639, rs146254972, rs748082671, rs1769913209 RCV003762021
RCV003764014
RCV003597148
RCV003762500
RCV003762683
View all (4 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
Acute myeloid leukemia Benign; Likely benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
CANDLE SYNDROME Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Clear cell carcinoma of kidney Benign; Likely benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
DENTAL CARIES GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Aicardi Goutieres syndrome Aicardi goutieres syndrome Pubtator 31874111 Associate
★☆☆☆☆
Found in Text Mining only
Alveolitis Extrinsic Allergic Extrinsic allergic alveolitis Pubtator 20153157 Associate
★☆☆☆☆
Found in Text Mining only
Anemia Anemia HPO_DG
★☆☆☆☆
Found in Text Mining only
Anemia hypochromic microcytic Hypochromic microcytic anemia Pubtator 21129723, 21953331 Associate
★☆☆☆☆
Found in Text Mining only
Ankylosing spondylitis Ankylosing Spondylitis BEFREE 19404951
★☆☆☆☆
Found in Text Mining only
Anxiety Anxiety Disorder BEFREE 30797047
★☆☆☆☆
Found in Text Mining only
Anxiety Disorders Anxiety Disorder BEFREE 30797047
★☆☆☆☆
Found in Text Mining only
Aortic Aneurysm, Abdominal Aortic Aneurysm BEFREE 30642978
★☆☆☆☆
Found in Text Mining only
Arachnodactyly Arachnodactyly HPO_DG
★☆☆☆☆
Found in Text Mining only
Arteriosclerosis Arteriosclerosis BEFREE 29042581
★☆☆☆☆
Found in Text Mining only