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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Essential tremor Tongue disorder
1 gene
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ESRRG(1)
0.010 1.000 6.30e-3 7.56e-3 ✓ sig. —
Glomerulonephritis phosphohydroxylysinuria
1 gene
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1 of 1 corroborated by 2+ sources
PHYKPL(2)
0.010 1.000 6.30e-3 7.56e-3 ✓ sig. Cluster 16 →
Essential tremor neurodevelopmental disorder with cerebellar atrophy and motor dysfunction
1 gene
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1 of 1 corroborated by 2+ sources
GEMIN5(2)
0.010 1.000 6.30e-3 7.56e-3 ✓ sig. Cluster 13 →
Glomerulonephritis Microscopic polyangiitis
1 gene
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CDH19(1)
0.010 1.000 6.30e-3 7.56e-3 ✓ sig. Cluster 16 →
developmental and epileptic encephalopathy, 41 Essential tremor
1 gene
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1 of 1 corroborated by 2+ sources
SLC1A2(2)
0.010 1.000 6.30e-3 7.56e-3 ✓ sig. —
Early-onset progressive neurodegeneration-blindness-ataxia-spasticity syndrome Glomerulonephritis
1 gene
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1 of 1 corroborated by 2+ sources
UCHL1(4)
0.010 1.000 6.30e-3 7.56e-3 ✓ sig. —
Autoinflammation with arthritis and dyskeratosis Essential tremor
1 gene
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1 of 1 corroborated by 2+ sources
NLRP1(5)
0.010 1.000 6.30e-3 7.56e-3 ✓ sig. —
Corneal intraepithelial dyskeratosis-palmoplantar hyperkeratosis-laryngeal dyskeratosis syndrome Essential tremor
1 gene
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1 of 1 corroborated by 2+ sources
NLRP1(4)
0.010 1.000 6.30e-3 7.56e-3 ✓ sig. —
Carnosinemia Glomerulonephritis
1 gene
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CNDP1(1)
0.010 1.000 6.30e-3 7.56e-3 ✓ sig. Cluster 16 →
Chromosome 2p16.3 deletion syndrome Glomerulonephritis
1 gene
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1 of 1 corroborated by 2+ sources
NRXN1(3)
0.010 1.000 6.30e-3 7.56e-3 ✓ sig. —
Glomerulonephritis Retrograde amnesia
1 gene
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1 of 1 corroborated by 2+ sources
PREP(2)
0.010 1.000 6.30e-3 7.56e-3 ✓ sig. —
Essential tremor Serrated polyposis
1 gene
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1 of 1 corroborated by 2+ sources
RNF43(2)
0.010 1.000 6.30e-3 7.56e-3 ✓ sig. —
Essential tremor sessile serrated polyposis cancer syndrome
1 gene
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1 of 1 corroborated by 2+ sources
RNF43(2)
0.010 1.000 6.30e-3 7.56e-3 ✓ sig. —
Glomerulonephritis systemic lupus erythematosus related to C1QA
1 gene
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1 of 1 corroborated by 2+ sources
C1QA(2)
0.010 1.000 6.30e-3 7.56e-3 ✓ sig. —
Glomerulonephritis immunodeficiency, common variable, 3
1 gene
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1 of 1 corroborated by 2+ sources
CD19(2)
0.010 1.000 6.30e-3 7.56e-3 ✓ sig. —
Adrenal gland neoplasms Congenital epicanthus
1 gene
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1 of 1 corroborated by 2+ sources
TCF4(2)
0.048 0.143 6.35e-3 7.62e-3 ✓ sig. —
Cholangitis Epidermodysplasia verruciformis
1 gene
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1 of 1 corroborated by 2+ sources
MST1(3)
0.048 0.143 6.35e-3 7.62e-3 ✓ sig. —
Interstitial nephritis Lynch syndrome
1 gene
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1 of 1 corroborated by 2+ sources
FAN1(5)
0.020 0.500 6.35e-3 7.62e-3 ✓ sig. —
Congenital cerebellar ataxia Differentiated thyroid carcinoma
1 gene
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1 of 1 corroborated by 2+ sources
GRM1(2)
0.020 0.500 6.35e-3 7.62e-3 ✓ sig. —
Congenital epithelial dysplasia of intestine Lynch syndrome
1 gene
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1 of 1 corroborated by 2+ sources
EPCAM(8)
0.020 0.500 6.35e-3 7.62e-3 ✓ sig. —
Lynch syndrome Sveinsson chorioretinal atrophy
1 gene
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1 of 1 corroborated by 2+ sources
SEMA4A(2)
0.020 0.500 6.35e-3 7.62e-3 ✓ sig. —
Cystic leukoencephalopathy Lynch syndrome
1 gene
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1 of 1 corroborated by 2+ sources
RNASET2(4)
0.020 0.500 6.35e-3 7.62e-3 ✓ sig. Cluster 166 →
Cardiac arrhythmia intrinsic cardiomyopathy
1 gene
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1 of 1 corroborated by 2+ sources
PLN(2)
0.010 1.000 6.36e-3 7.63e-3 ✓ sig. Cluster 4 →
Cardiac arrhythmia Lafora body disease
1 gene
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1 of 1 corroborated by 2+ sources
PRDM8(3)
0.010 1.000 6.36e-3 7.63e-3 ✓ sig. —
multiple congenital anomalies-hypotonia-seizures syndrome 1 Preeclampsia
1 gene
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1 of 1 corroborated by 2+ sources
PIGN(2)
0.010 1.000 6.36e-3 7.63e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.