Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Leukemia SYNCRIP-related neurodevelopmental disorder
1 gene
Show details
1 of 1 corroborated by 2+ sources
SYNCRIP(2)
0.023 1.000 2.79e-3 3.75e-3 ✓ sig. Cluster 53 →
Colonic disease Pituitary dwarfism
1 gene
Show details
GHR(1)
0.023 1.000 2.79e-3 3.75e-3 ✓ sig. —
frontotemporal dementia and/or amyotrophic lateral sclerosis 7 Panhypopituitarism
1 gene
Show details
1 of 1 corroborated by 2+ sources
CHMP2B(2)
0.023 1.000 2.79e-3 3.75e-3 ✓ sig. —
GPR143-related foveal hypoplasia Nystagmus
1 gene
Show details
1 of 1 corroborated by 2+ sources
GPR143(6)
0.023 1.000 2.79e-3 3.75e-3 ✓ sig. —
intellectual disability, autosomal dominant 42 Nystagmus
1 gene
Show details
1 of 1 corroborated by 2+ sources
GNB1(2)
0.023 1.000 2.79e-3 3.75e-3 ✓ sig. —
Nasopharyngeal neoplasms pyruvate dehydrogenase E3 deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
DLD(2)
0.023 1.000 2.79e-3 3.75e-3 ✓ sig. —
mucopolysaccharidosis type 3A Nystagmus
1 gene
Show details
1 of 1 corroborated by 2+ sources
SGSH(2)
0.023 1.000 2.79e-3 3.75e-3 ✓ sig. —
Hurthle cell thyroid cancer Nystagmus
1 gene
Show details
1 of 1 corroborated by 2+ sources
NDUFA13(2)
0.023 1.000 2.79e-3 3.75e-3 ✓ sig. —
Hyperemesis gravidarum Sideroblastic anemia
1 gene
Show details
1 of 1 corroborated by 2+ sources
GDF15(4)
0.067 0.250 2.85e-3 3.81e-3 ✓ sig. —
Sarcopenia Xeroderma
1 gene
Show details
1 of 1 corroborated by 2+ sources
SUPV3L1(2)
0.067 0.250 2.85e-3 3.81e-3 ✓ sig. —
Auriculocondylar syndrome Cardiovascular abnormalities
1 gene
Show details
1 of 1 corroborated by 2+ sources
EDN1(7)
0.067 0.250 2.85e-3 3.81e-3 ✓ sig. —
Testicular hydrocele Testotoxicosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
INHBB(3)
0.067 0.250 2.85e-3 3.81e-3 ✓ sig. —
Demyelinating diseases Wallerian degeneration
1 gene
Show details
1 of 1 corroborated by 2+ sources
SIRT1(2)
0.067 0.250 2.85e-3 3.81e-3 ✓ sig. —
Central serous retinopathy Developmental delay with impaired growth and dysmorphic facies
1 gene
Show details
1 of 1 corroborated by 2+ sources
ARFGEF1(5)
0.067 0.250 2.85e-3 3.81e-3 ✓ sig. —
Chromosomal disorder Silver-russell syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
GRB10(2)
0.067 0.250 2.85e-3 3.81e-3 ✓ sig. Cluster 199 →
Ataxia telangiectasia Chromosome 2q37 deletion syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
HDAC4(4)
0.067 0.250 2.85e-3 3.81e-3 ✓ sig. —
Cardiovascular abnormalities Primary graft dysfunction
1 gene
Show details
1 of 1 corroborated by 2+ sources
GATA2(2)
0.067 0.250 2.85e-3 3.81e-3 ✓ sig. Cluster 136 →
Knobloch syndrome Transposition of the great arteries
1 gene
Show details
SLC19A1(1)
0.067 0.250 2.85e-3 3.81e-3 ✓ sig. Cluster 113 →
Intestinal polyposis Keratitis
1 gene
Show details
1 of 1 corroborated by 2+ sources
STK11(3)
0.042 0.500 2.86e-3 3.81e-3 ✓ sig. —
Iron metabolism disorder Iron-refractory iron deficiency anemia
1 gene
Show details
1 of 1 corroborated by 2+ sources
TMPRSS6(5)
0.042 0.500 2.86e-3 3.81e-3 ✓ sig. —
Gastritis Keratosis palmoplantaris papulosa
1 gene
Show details
1 of 1 corroborated by 2+ sources
COL14A1(2)
0.042 0.500 2.86e-3 3.81e-3 ✓ sig. Cluster 1 →
Horizontal gaze palsy with progressive scoliosis Keratitis
1 gene
Show details
1 of 1 corroborated by 2+ sources
DCC(2)
0.042 0.500 2.86e-3 3.81e-3 ✓ sig. —
Acral peeling skin syndrome Nasopharyngeal carcinoma
1 gene
Show details
1 of 1 corroborated by 2+ sources
CSTA(2)
0.042 0.500 2.86e-3 3.81e-3 ✓ sig. —
Agenesis of corpus callosum Cerebral arteriovenous malformations
1 gene
Show details
1 of 1 corroborated by 2+ sources
CDH2(3)
0.042 0.500 2.86e-3 3.81e-3 ✓ sig. —
Blepharitis Erythematosquamous dermatosis
1 gene
Show details
MC1R(1)
0.042 0.500 2.86e-3 3.81e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.