Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Vitamin d deficiency Vitamin d dependent rickets
1 gene
Show details
1 of 1 corroborated by 2+ sources
VDR(5)
0.100 0.333 1.36e-3 2.15e-3 ✓ sig. —
Hereditary elliptocytosis Xerocytosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
SLC4A1(2)
0.100 0.333 1.36e-3 2.15e-3 ✓ sig. —
Desbuquois dysplasia Graft versus host disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
XYLT1(4)
0.100 0.333 1.36e-3 2.15e-3 ✓ sig. Cluster 128 →
Follicular thyroid cancer Ovarian diseases
1 gene
Show details
1 of 1 corroborated by 2+ sources
CGA(2)
0.100 0.333 1.36e-3 2.15e-3 ✓ sig. —
Focal cortical dysplasia overgrowth syndrome and/or cerebral malformations due to abnormalities in MTOR pathway genes
1 gene
Show details
1 of 1 corroborated by 2+ sources
MTOR(4)
0.100 0.333 1.36e-3 2.15e-3 ✓ sig. —
Hepatic veno occlusive disease Pseudo-torch syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
OCLN(6)
0.100 0.333 1.36e-3 2.15e-3 ✓ sig. —
Leiomyosarcoma Pseudo-torch syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
USP18(6)
0.100 0.333 1.36e-3 2.15e-3 ✓ sig. Cluster 213 →
Becker muscular dystrophy Leiomyosarcoma
1 gene
Show details
1 of 1 corroborated by 2+ sources
DMD(5)
0.100 0.333 1.36e-3 2.15e-3 ✓ sig. Cluster 213 →
Caudal regression syndrome Congenital omphalocele
1 gene
Show details
PCSK5(1)
0.100 0.333 1.36e-3 2.15e-3 ✓ sig. Cluster 94 →
Cholestasis Testicular neoplasms
1 gene
Show details
1 of 1 corroborated by 2+ sources
ERCC1(2)
0.100 0.333 1.36e-3 2.15e-3 ✓ sig. —
Chudley-mccullough syndrome Hereditary elliptocytosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
SPTB(4)
0.100 0.333 1.36e-3 2.15e-3 ✓ sig. Cluster 400 →
hearing loss, autosomal recessive Pericardium disorder
1 gene
Show details
1 of 1 corroborated by 2+ sources
PTPRQ(2)
0.100 0.333 1.36e-3 2.15e-3 ✓ sig. Cluster 278 →
Hepatitis c induced liver cirrhosis Pemphigus vulgaris
1 gene
Show details
HLA-DRA(1)
0.100 0.333 1.36e-3 2.15e-3 ✓ sig. Cluster 1 →
Hereditary elliptocytosis Hereditary xerocytosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
SLC4A1(3)
0.100 0.333 1.36e-3 2.15e-3 ✓ sig. —
Congenital bone marrow failure syndrome Shwachman-diamond syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
DNAJC21(6)
0.100 0.333 1.36e-3 2.15e-3 ✓ sig. —
Congenital anomalies of kidney and urinary tract congenital anomalies of kidney and urinary tract syndrome with or without hearing loss, abnormal ears, or developmental delay
1 gene
Show details
1 of 1 corroborated by 2+ sources
PBX1(5)
0.045 1.000 1.36e-3 2.15e-3 ✓ sig. —
Bmp4-related ocular growth disorder Congenital anomalies of kidney and urinary tract
1 gene
Show details
1 of 1 corroborated by 2+ sources
BMP4(3)
0.045 1.000 1.36e-3 2.15e-3 ✓ sig. —
Congenital anomalies of kidney and urinary tract Yuksel-vogel-bauer syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
DLG5(4)
0.045 1.000 1.36e-3 2.15e-3 ✓ sig. —
Congenital anomalies of kidney and urinary tract Zhu-tokita-takenouchi-kim syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
SON(7)
0.045 1.000 1.36e-3 2.15e-3 ✓ sig. —
Congenital anomalies of kidney and urinary tract congenital anomaly of kidney and urinary tract
1 gene
Show details
1 of 1 corroborated by 2+ sources
CHD1L(2)
0.045 1.000 1.36e-3 2.15e-3 ✓ sig. —
2q37 microdeletion syndrome Brachydactyly
1 gene
Show details
1 of 1 corroborated by 2+ sources
HDAC4(2)
0.045 1.000 1.36e-3 2.15e-3 ✓ sig. —
Acrocapitofemoral dysplasia Brachydactyly
1 gene
Show details
1 of 1 corroborated by 2+ sources
IHH(6)
0.045 1.000 1.36e-3 2.15e-3 ✓ sig. Cluster 352 →
Angel-shaped phalangoepiphyseal dysplasia Brachydactyly
1 gene
Show details
1 of 1 corroborated by 2+ sources
GDF5(7)
0.045 1.000 1.36e-3 2.15e-3 ✓ sig. —
Cushing syndrome familial hyperaldosteronism type III
1 gene
Show details
1 of 1 corroborated by 2+ sources
KCNJ5(2)
0.045 1.000 1.36e-3 2.15e-3 ✓ sig. —
free sialic acid storage disease Intracerebral hemorrhage
1 gene
Show details
1 of 1 corroborated by 2+ sources
SLC17A5(2)
0.045 1.000 1.36e-3 2.15e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.