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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Congenital macrodactylia Diaphragmatic malformations
1 gene
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1 of 1 corroborated by 2+ sources
PIK3CA(2)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. Cluster 44 →
Congenital malformation syndromes involving early overgrowth Diaphragmatic malformations
1 gene
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PIK3CA(1)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. Cluster 44 →
dilated cardiomyopathy 1O Kleefstra syndrome
1 gene
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1 of 1 corroborated by 2+ sources
ABCC9(2)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. Cluster 234 →
Disseminated superficial actinic porokeratosis Hyper-igd syndrome
1 gene
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1 of 1 corroborated by 2+ sources
MVK(2)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. —
Distal axonal motor neuropathy-myofibrillar myopathy syndrome Vacuolar myopathy
1 gene
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1 of 1 corroborated by 2+ sources
HSPB8(2)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. —
Congenital nemaline myopathy Distal nebulin myopathy
1 gene
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1 of 1 corroborated by 2+ sources
NEB(3)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. Cluster 51 →
Dubin-johnson syndrome Pseudoxanthoma elasticum
1 gene
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1 of 1 corroborated by 2+ sources
ABCC2(5)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. Cluster 128 →
Commissural facial cleft Duplication of pituitary gland
1 gene
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1 of 1 corroborated by 2+ sources
PTCH2(2)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. Cluster 203 →
dyskeratosis congenita, autosomal dominant 2 Respiratory system cancer
1 gene
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1 of 1 corroborated by 2+ sources
TERT(2)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. Cluster 294 →
dyskeratosis congenita, autosomal recessive 3 Li-fraumeni syndrome
1 gene
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1 of 1 corroborated by 2+ sources
WRAP53(2)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. —
dyskeratosis congenita, autosomal recessive 3 Telomere syndrome
1 gene
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1 of 1 corroborated by 2+ sources
WRAP53(2)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. Cluster 64 →
East syndrome Littles disease
1 gene
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1 of 1 corroborated by 2+ sources
KCNJ10(4)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. Cluster 58 →
East syndrome Paroxysmal dyskinesia
1 gene
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1 of 1 corroborated by 2+ sources
KCNJ10(4)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. Cluster 58 →
16q24.3 microdeletion syndrome Conductive hearing loss
1 gene
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1 of 1 corroborated by 2+ sources
ANKRD11(2)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. —
Abcd syndrome Kleins syndrome
1 gene
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1 of 1 corroborated by 2+ sources
EDNRB(2)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. —
Acces syndrome Aplasia cutis congenita
1 gene
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1 of 1 corroborated by 2+ sources
UBA2(4)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. —
Acral self-healing collodion baby Vitamin a deficiency
1 gene
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1 of 1 corroborated by 2+ sources
TGM1(3)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. —
Acromegaloid facial appearance syndrome Kleefstra syndrome
1 gene
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1 of 1 corroborated by 2+ sources
ABCC9(2)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. Cluster 234 →
Aland island eye disease Ocular albinism
1 gene
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CACNA1F(1)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. Cluster 84 →
Alcoholic hepatitis Refractory anemia
1 gene
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1 of 1 corroborated by 2+ sources
TNF(2)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. —
Alcoholic hepatitis Autoimmune uveitis
1 gene
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1 of 1 corroborated by 2+ sources
CXCL8(2)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. Cluster 76 →
Alcoholic hepatitis X-linked ichthyosis with steryl-sulfatase deficiency
1 gene
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1 of 1 corroborated by 2+ sources
STS(2)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. Cluster 76 →
Alkuraya-kucinskas syndrome Congenital hemivertebra
1 gene
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1 of 1 corroborated by 2+ sources
BLTP1(3)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. —
alkylglycerone-phosphate synthase deficiency Rhizomelic chondrodysplasia punctata
1 gene
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1 of 1 corroborated by 2+ sources
AGPS(7)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. Cluster 301 →
Alpha-actinopathy Congenital nemaline myopathy
1 gene
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1 of 1 corroborated by 2+ sources
ACTA1(4)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.