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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Atrophic retina Diastolic heart failure
1 gene
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1 of 1 corroborated by 2+ sources
ABCA4(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Atrophic retina Retinopathy background
1 gene
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ABCA4(1)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Atypical fanconi syndrome Fanconi renotubular syndrome 4 with maturity-onset diabetes of the young
1 gene
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1 of 1 corroborated by 2+ sources
HNF4A(6)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Atypical multiple mole melanoma syndrome Vulvar lichen sclerosus
1 gene
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1 of 1 corroborated by 2+ sources
CDKN2A(4)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Atypical teratoid rhabdoid tumor Rhabdoid tumor
1 gene
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1 of 1 corroborated by 2+ sources
SMARCB1(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 120 →
Atypical teratoid rhabdoid tumor Rhabdoid tumor predisposition syndrome
1 gene
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1 of 1 corroborated by 2+ sources
SMARCB1(7)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 120 →
Auditory neuropathy with optic atrophy FDXR-related optic atrophy mitochondrial dysfunction syndrome
1 gene
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1 of 1 corroborated by 2+ sources
FDXR(6)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Auditory perceptual disorder Craniofacial anomalies with anterior segment dysgenesis
1 gene
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1 of 1 corroborated by 2+ sources
VSX1(5)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 75 →
Autoimmune interstitial lung disease-arthritis syndrome Autoinflammation and autoimmunity, systemic, with immune dysregulation 1
1 gene
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1 of 1 corroborated by 2+ sources
COPA(5)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency Haploinsufficiency
1 gene
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1 of 1 corroborated by 2+ sources
CTLA4(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Autoimmune pancreatitis autosomal recessive osteopetrosis 3
1 gene
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1 of 1 corroborated by 2+ sources
CA2(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 1 →
Autoimmune pulmonary alveolar proteinosis Thromboangiitis obliterans
1 gene
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1 of 1 corroborated by 2+ sources
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 1 →
Autoinflammation with infantile enterocolitis Cria syndrome
1 gene
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1 of 1 corroborated by 2+ sources
RIPK1(4)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 264 →
Autoinflammation with infantile enterocolitis Immune dysregulation-inflammatory bowel disease-arthritis-recurrent infection-lymphopenia syndrome
1 gene
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1 of 1 corroborated by 2+ sources
RIPK1(5)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 264 →
Autoinflammation with infantile enterocolitis immunodeficiency 57
1 gene
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1 of 1 corroborated by 2+ sources
RIPK1(4)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 264 →
Autoinflammation, immunodeficiency, and neutrophil dysfunction syndrome Pelger-huet anomaly
1 gene
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1 of 1 corroborated by 2+ sources
CEBPE(3)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Autoinflammation, immunodeficiency, and neutrophil dysfunction syndrome Specific granule deficiency
1 gene
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1 of 1 corroborated by 2+ sources
CEBPE(6)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Autoinflammation, panniculitis, and dermatosis syndrome, autosomal dominant Craniometadiaphyseal dysplasia
1 gene
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1 of 1 corroborated by 2+ sources
OTULIN(3)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 208 →
Autoinflammation, panniculitis, and dermatosis syndrome, autosomal recessive Craniometadiaphyseal dysplasia
1 gene
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1 of 1 corroborated by 2+ sources
OTULIN(6)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 208 →
Autoinflammatory disease, familial, behcet-like 3 Mucocutaneous ulceration
1 gene
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1 of 1 corroborated by 2+ sources
RELA(4)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Autoinflammatory disease, familial, behcet-like 3 combined immunodeficiency due to RELA haploinsufficiency
1 gene
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1 of 1 corroborated by 2+ sources
RELA(3)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Autoinflammatory disease, systemic, x-linked G6PD deficiency
1 gene
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1 of 1 corroborated by 2+ sources
G6PD(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 87 →
Autoinflammatory syndrome with cytopenia, hyperzincemia, and hypercalprotectinemia Pyogenic arthritis-pyoderma gangrenosum-acne syndrome
1 gene
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1 of 1 corroborated by 2+ sources
PSTPIP1(4)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Autoinflammatory syndrome with pyogenic bacterial infection and amylopectinosis polyglucosan body myopathy 1 with or without immunodeficiency
1 gene
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1 of 1 corroborated by 2+ sources
RBCK1(4)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Autoinflammatory syndrome with pyogenic bacterial infection and amylopectinosis immunodeficiency 115 with autoinflammation
1 gene
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1 of 1 corroborated by 2+ sources
RNF31(4)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.