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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Dna ligase iv deficiency Lig4 syndrome
1 gene
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1 of 1 corroborated by 2+ sources
LIG4(6)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Dna repair-deficiency disorders microcephaly, seizures, and developmental delay
1 gene
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1 of 1 corroborated by 2+ sources
PNKP(3)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Dominant dystrophic epidermolysis bullosa with absence of skin Dystrophic epidermolysis bullosa
1 gene
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1 of 1 corroborated by 2+ sources
COL7A1(8)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 160 →
Dominant dystrophic epidermolysis bullosa with absence of skin Nail dystrophy
1 gene
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1 of 1 corroborated by 2+ sources
COL7A1(3)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 160 →
Dominant dystrophic epidermolysis bullosa with absence of skin Hallopeau siemens disease
1 gene
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1 of 1 corroborated by 2+ sources
COL7A1(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 160 →
Dominant dystrophic epidermolysis bullosa, albopapular type Dystrophic epidermolysis bullosa
1 gene
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1 of 1 corroborated by 2+ sources
COL7A1(8)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 160 →
Dominant dystrophic epidermolysis bullosa, albopapular type Nail dystrophy
1 gene
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1 of 1 corroborated by 2+ sources
COL7A1(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 160 →
Dominant dystrophic epidermolysis bullosa, albopapular type Hallopeau siemens disease
1 gene
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COL7A1(1)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 160 →
Donnai-barrow syndrome methylmalonic aciduria and homocystinuria type cblF
1 gene
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1 of 1 corroborated by 2+ sources
LMBRD1(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Donohue syndrome Insulin resistant diabetes mellitus
1 gene
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1 of 1 corroborated by 2+ sources
INSR(7)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Doors syndrome Focal epilepsy-intellectual disability-cerebro-cerebellar malformation
1 gene
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1 of 1 corroborated by 2+ sources
TBC1D24(4)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 90 →
Dorfman-chanarin disease Neutral lipid storage disease with ichthyosis
1 gene
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1 of 1 corroborated by 2+ sources
ABHD5(3)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Duplication of pituitary gland Tessier facial cleft
1 gene
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PTCH2(1)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 203 →
Duplication of pituitary gland nevoid basal cell carcinoma syndrome
1 gene
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1 of 1 corroborated by 2+ sources
PTCH2(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 203 →
Dyggve-melchior-clausen syndrome Smith-mccort dysplasia
1 gene
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1 of 1 corroborated by 2+ sources
DYM(6)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Dysautonomia Riley-day syndrome
1 gene
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1 of 1 corroborated by 2+ sources
ELP1(5)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Dyschromatopsia EYS-related retinopathy
1 gene
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1 of 1 corroborated by 2+ sources
EYS(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
dyskeratosis congenita, autosomal dominant 2 Tongue cancer
1 gene
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1 of 1 corroborated by 2+ sources
TERT(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
dyskeratosis congenita, x-linked X-linked dyskeratosis congenita
1 gene
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1 of 1 corroborated by 2+ sources
DKC1(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 64 →
Dysphonia Intermittent explosive disorder
1 gene
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COMT(1)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 97 →
Dysphonia perrault syndrome 5
1 gene
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1 of 1 corroborated by 2+ sources
TWNK(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 97 →
Dyssegmental dysplasia Silverman-Handmaker type dyssegmental dysplasia
1 gene
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1 of 1 corroborated by 2+ sources
HSPG2(5)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 350 →
Early-onset severe hermansky-pudlak syndrome with hearing loss due to ap3d1 deficiency X-linked ocular abinism
1 gene
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AP3D1(1)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 414 →
East syndrome Seizures, tonic-clonic, photosensitive
1 gene
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1 of 1 corroborated by 2+ sources
KCNJ10(5)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 58 →
East texas bleeding disorder Factor v deficiency
1 gene
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1 of 1 corroborated by 2+ sources
F5(5)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 37 →

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.