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Gene Gene information from NCBI Gene database.
Entrez ID 7186
Gene name TNF receptor associated factor 2
Gene symbol TRAF2
Synonyms (NCBI Gene)
MGC:45012RNF117TRAPTRAP3
Chromosome 9
Chromosome location 9q34.3
Summary The protein encoded by this gene is a member of the TNF receptor associated factor (TRAF) protein family. TRAF proteins associate with, and mediate the signal transduction from members of the TNF receptor superfamily. This protein directly interacts with
miRNA miRNA information provided by mirtarbase database.
122 Show/Hide all (122)
miRTarBase ID miRNA Experiments Reference
MIRT437984 hsa-miR-502-5p qRT-PCRLuciferase reporter assayWestern blot 24677135
MIRT437984 hsa-miR-502-5p qRT-PCRLuciferase reporter assayWestern blot 24677135
MIRT437984 hsa-miR-502-5p qRT-PCRLuciferase reporter assayWestern blot 24677135
MIRT437984 hsa-miR-502-5p qRT-PCRLuciferase reporter assayWestern blot 24677135
MIRT437984 hsa-miR-502-5p qRT-PCRLuciferase reporter assayWestern blot 24677135
Transcription factors Transcription factors information provided by TRRUST V2 database.
6 Show/Hide all (6)
Transcription factor Regulation Reference
NFKB1 Activation 15041463
NFKB1 Repression 15723831
NFKB1 Unknown 19392652
RELA Activation 15041463
RELA Repression 15723831
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
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GO ID Ontology Definition Evidence Reference
GO:0000151 Component Ubiquitin ligase complex IPI 17314283
GO:0002637 Process Regulation of immunoglobulin production IEA
GO:0002700 Process Regulation of production of molecular mediator of immune response IEA
GO:0002726 Process Positive regulation of T cell cytokine production IMP 15125833
GO:0002947 Component Tumor necrosis factor receptor superfamily complex IDA 23429285
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
601895 12032 ENSG00000127191
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q12933
Protein name TNF receptor-associated factor 2 (EC 2.3.2.27) (E3 ubiquitin-protein ligase TRAF2) (RING-type E3 ubiquitin transferase TRAF2) (Tumor necrosis factor type 2 receptor-associated protein 3)
Protein function E3 ubiquitin-protein ligase that regulates activation of NF-kappa-B and JNK and plays a central role in the regulation of cell survival and apoptosis (PubMed:10346818, PubMed:11784851, PubMed:12917689, PubMed:15383523, PubMed:18981220, PubMed:19
PDB 1CA4 , 1CA9 , 1CZY , 1CZZ , 1D00 , 1D01 , 1D0A , 1D0J , 1F3V , 1QSC , 3KNV , 3M06 , 3M0A , 3M0D , 8T5Q
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00097 zf-C3HC4 34 → 72 Zinc finger, C3HC4 type (RING finger) Domain
PF02176 zf-TRAF 178 → 235 TRAF-type zinc finger Family
PF16673 TRAF_BIRC3_bd 267 → 330 TNF receptor-associated factor BIRC3 binding domain Coiled-coil
Sequence
MAAASVTPPGSLELLQPGFSKTLLGTKLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLAS
ILSSGPQNCAAC
VHEGIYEEGISILESSSAFPDNAARREVESLPAVCPSDGCTWKGTLKE
YESCHEGRCPLMLTECPACKGLVRLGEKERHLEHECPERSLSCRHCRAPCCGADVKAHHE
VCPKFPLTCDGCGKKKIPREKFQDHVKTCGKCRVPCRFHAIGCLETVEGEKQQEH
EVQWL
REHLAMLLSSVLEAKPLLGDQSHAGSELLQRCESLEKKTATFENIVCVLNREVERVAMTA
EACSRQHRLDQDKIEALSSKVQQLERSIGL
KDLAMADLEQKVLEMEASTYDGVFIWKISD
FARKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDA
LLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVNDMNIASGCPLFCPVSKMEA
KNSYVRDDAIFIKAIVDLTGL
Sequence length 501
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
KEGG Pathway Reactome Pathway
MAPK signaling pathway Caspase activation via Death Receptors in the presence of ligand
NF-kappa B signaling pathway Regulation by c-FLIP
Sphingolipid signaling pathway RIPK1-mediated regulated necrosis
Mitophagy - animal CASP8 activity is inhibited
Protein processing in endoplasmic reticulum TNFR1-induced proapoptotic signaling
Apoptosis Regulation of TNFR1 signaling
Necroptosis TNFR1-induced NFkappaB signaling pathway
Osteoclast differentiation TNFR2 non-canonical NF-kB pathway
NOD-like receptor signaling pathway Regulation of necroptotic cell death
RIG-I-like receptor signaling pathway TNF receptor superfamily (TNFSF) members mediating non-canonical NF-kB pathway
IL-17 signaling pathway Ub-specific processing proteases
TNF signaling pathway Dimerization of procaspase-8
Adipocytokine signaling pathway TNF signaling
Non-alcoholic fatty liver disease TRAF6 mediated IRF7 activation
Alzheimer disease TRAF6 mediated NF-kB activation
Amyotrophic lateral sclerosis  
Huntington disease  
Spinocerebellar ataxia  
Pathways of neurodegeneration - multiple diseases  
Pathogenic Escherichia coli infection  
Shigellosis  
Salmonella infection  
Yersinia infection  
Hepatitis C  
Human cytomegalovirus infection  
Kaposi sarcoma-associated herpesvirus infection  
Herpes simplex virus 1 infection  
Epstein-Barr virus infection  
Human immunodeficiency virus 1 infection  
Pathways in cancer  
Viral carcinogenesis  
Small cell lung cancer  
Lipid and atherosclerosis  
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
10
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Show/Hide Unknown Diseases (10)
Phenotype Name Clinical Significance Source Reference Evidence Score
Acute myeloid leukemia Benign ClinVar —
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Familial cancer of breast Likely benign; Benign ClinVar —
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Gastric cancer Benign ClinVar —
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Hepatocellular carcinoma Benign ClinVar —
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Lung cancer Benign ClinVar —
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations