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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Congestive heart failure short chain acyl-coa dehydrogenase deficiency
1 gene
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1 of 1 corroborated by 2+ sources
ACADS(2)
0.006 1.000 1.16e-2 1.31e-2 ✓ sig. —
Congestive heart failure phosphoenolpyruvate carboxykinase deficiency, cytosolic
1 gene
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1 of 1 corroborated by 2+ sources
PCK1(2)
0.006 1.000 1.16e-2 1.31e-2 ✓ sig. —
Congestive heart failure Yoon-bellen neurodevelopmental syndrome
1 gene
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1 of 1 corroborated by 2+ sources
OGDHL(3)
0.006 1.000 1.16e-2 1.31e-2 ✓ sig. —
Congestive heart failure Hmg-coa synthase deficiency
1 gene
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1 of 1 corroborated by 2+ sources
HMGCS2(4)
0.006 1.000 1.16e-2 1.31e-2 ✓ sig. —
Congestive heart failure hyperphosphatasia with intellectual disability syndrome 4
1 gene
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1 of 1 corroborated by 2+ sources
PGAP3(2)
0.006 1.000 1.16e-2 1.31e-2 ✓ sig. —
Charcot-Marie-Tooth disease type 4B2 Congestive heart failure
1 gene
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1 of 1 corroborated by 2+ sources
SBF2(2)
0.006 1.000 1.16e-2 1.31e-2 ✓ sig. —
Claudication Congestive heart failure
1 gene
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AGXT2(1)
0.006 1.000 1.16e-2 1.31e-2 ✓ sig. —
Acetyl-coa carboxylase deficiency Congestive heart failure
1 gene
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1 of 1 corroborated by 2+ sources
ACACA(2)
0.006 1.000 1.16e-2 1.31e-2 ✓ sig. —
Beta-aminoisobutyric aciduria Congestive heart failure
1 gene
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1 of 1 corroborated by 2+ sources
AGXT2(3)
0.006 1.000 1.16e-2 1.31e-2 ✓ sig. —
Hemorrhoid Myoadenylate deaminase deficiency
1 gene
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AMPD3(1)
0.011 0.500 1.15e-2 1.29e-2 ✓ sig. —
optic atrophy 13 with retinal and foveal abnormalities Skin disease
1 gene
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1 of 1 corroborated by 2+ sources
SSBP1(3)
0.006 1.000 1.15e-2 1.29e-2 ✓ sig. Cluster 29 →
Peripheral arterial disease perrault syndrome 3
1 gene
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1 of 1 corroborated by 2+ sources
CLPP(2)
0.006 1.000 1.15e-2 1.29e-2 ✓ sig. —
Congenital cerebellar hypoplasia Peripheral arterial disease
1 gene
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1 of 1 corroborated by 2+ sources
OXR1(3)
0.006 1.000 1.15e-2 1.29e-2 ✓ sig. —
leukodystrophy, hypomyelinating, 18 Skin disease
1 gene
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1 of 1 corroborated by 2+ sources
DEGS1(2)
0.006 1.000 1.15e-2 1.29e-2 ✓ sig. —
Hypochromic sideroblastic anemia Skin disease
1 gene
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1 of 1 corroborated by 2+ sources
STEAP3(6)
0.006 1.000 1.15e-2 1.29e-2 ✓ sig. —
COG6-congenital disorder of glycosylation Peripheral arterial disease
1 gene
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1 of 1 corroborated by 2+ sources
COG6(2)
0.006 1.000 1.15e-2 1.29e-2 ✓ sig. —
Intermittent porphyria Peripheral arterial disease
1 gene
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1 of 1 corroborated by 2+ sources
HMBS(3)
0.006 1.000 1.15e-2 1.29e-2 ✓ sig. —
Juvenile absence epilepsy Peripheral arterial disease
1 gene
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1 of 1 corroborated by 2+ sources
EFHC1(2)
0.006 1.000 1.15e-2 1.29e-2 ✓ sig. —
Kindler epidermolysis bullosa Skin disease
1 gene
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1 of 1 corroborated by 2+ sources
FERMT1(2)
0.006 1.000 1.15e-2 1.29e-2 ✓ sig. —
kindler syndrome Skin disease
1 gene
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1 of 1 corroborated by 2+ sources
FERMT1(2)
0.006 1.000 1.15e-2 1.29e-2 ✓ sig. —
Heterotaxy syndrome Ileocolitis
1 gene
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1 of 1 corroborated by 2+ sources
CFAP45(5)
0.033 0.125 1.14e-2 1.28e-2 ✓ sig. Cluster 46 →
Growth disorder Uv-sensitive syndrome
1 gene
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1 of 1 corroborated by 2+ sources
ERCC6(6)
0.025 0.200 1.13e-2 1.27e-2 ✓ sig. —
Endometrial cancer friedreich ataxia
1 gene
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1 of 1 corroborated by 2+ sources
FXN(2)
0.006 1.000 1.13e-2 1.27e-2 ✓ sig. Cluster 67 →
Brain aneurysm Trimethylaminuria
1 gene
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1 of 1 corroborated by 2+ sources
FMO4(2)
0.011 0.500 1.13e-2 1.27e-2 ✓ sig. —
Deafness Worster drought syndrome
1 gene
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1 of 1 corroborated by 2+ sources
TMTC4(2)
0.006 1.000 1.12e-2 1.26e-2 ✓ sig. Cluster 26 →

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.