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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
X-linked centronuclear myopathy X-linked myotubular myopathy
1 gene
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1 of 1 corroborated by 2+ sources
MTM1(4)
0.250 0.500 2.60e-4 6.51e-4 ✓ sig. Cluster 59 →
Cone dystrophy, x-linked X-linked cone dysfunction syndrome with myopia
1 gene
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1 of 1 corroborated by 2+ sources
OPN1MW(2)
0.250 0.500 2.60e-4 6.51e-4 ✓ sig. Cluster 214 →
Scapuloperoneal myopathy X-linked emery-dreifuss muscular dystrophy
1 gene
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1 of 1 corroborated by 2+ sources
FHL1(5)
0.250 0.500 2.60e-4 6.51e-4 ✓ sig. —
Scapuloperoneal myopathy X-linked myopathy
1 gene
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1 of 1 corroborated by 2+ sources
FHL1(5)
0.250 0.500 2.60e-4 6.51e-4 ✓ sig. —
X-linked emery-dreifuss muscular dystrophy X-linked myopathy
1 gene
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1 of 1 corroborated by 2+ sources
FHL1(5)
0.250 0.500 2.60e-4 6.51e-4 ✓ sig. Cluster 415 →
Congenital aniridia Desmoplastic small round cell tumor
1 gene
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1 of 1 corroborated by 2+ sources
WT1(2)
0.250 0.500 2.60e-4 6.51e-4 ✓ sig. Cluster 35 →
Cone dystrophy, x-linked Deuteranomaly
1 gene
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1 of 1 corroborated by 2+ sources
OPN1MW(2)
0.250 0.500 2.60e-4 6.51e-4 ✓ sig. Cluster 214 →
Cone monochromatism Deuteranomaly
1 gene
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1 of 1 corroborated by 2+ sources
OPN1MW(2)
0.250 0.500 2.60e-4 6.51e-4 ✓ sig. Cluster 214 →
Deuteranomaly X-linked cone dysfunction syndrome with myopia
1 gene
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1 of 1 corroborated by 2+ sources
OPN1MW(3)
0.250 0.500 2.60e-4 6.51e-4 ✓ sig. Cluster 214 →
Developmental delay with language impairment and movement disorder Intellectual developmental disorder autism speech
1 gene
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1 of 1 corroborated by 2+ sources
TBR1(4)
0.250 0.500 2.60e-4 6.51e-4 ✓ sig. Cluster 275 →
Camurati-engelmann syndrome Diaphyseal bone disorder
1 gene
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1 of 1 corroborated by 2+ sources
TGFB1(6)
0.250 0.500 2.60e-4 6.51e-4 ✓ sig. —
Diastolic heart failure Retinopathy background
1 gene
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1 of 1 corroborated by 2+ sources
ABCA4(2)
0.250 0.500 2.60e-4 6.51e-4 ✓ sig. —
Congenital scoliosis Dilatation of pulmonary artery
1 gene
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FBN1(1)
0.250 0.500 2.60e-4 6.51e-4 ✓ sig. Cluster 52 →
Distal amyotrophy Lysine metabolism disorder
1 gene
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DHTKD1(1)
0.250 0.500 2.60e-4 6.51e-4 ✓ sig. —
Dubowitz syndrome Lig4 syndrome
1 gene
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1 of 1 corroborated by 2+ sources
LIG4(4)
0.250 0.500 2.60e-4 6.51e-4 ✓ sig. —
Dystrophic epidermolysis bullosa Nail dystrophy
1 gene
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1 of 1 corroborated by 2+ sources
COL7A1(8)
0.250 0.500 2.60e-4 6.51e-4 ✓ sig. Cluster 160 →
Dystrophic epidermolysis bullosa Hallopeau siemens disease
1 gene
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1 of 1 corroborated by 2+ sources
COL7A1(8)
0.250 0.500 2.60e-4 6.51e-4 ✓ sig. Cluster 160 →
Ectopic rhythm Paroxysmal ventricular fibrillation
1 gene
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1 of 1 corroborated by 2+ sources
SCN5A(2)
0.250 0.500 2.60e-4 6.51e-4 ✓ sig. Cluster 129 →
Elsahy-waters syndrome Teebi syndrome
1 gene
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1 of 1 corroborated by 2+ sources
CDH11(5)
0.250 0.500 2.60e-4 6.51e-4 ✓ sig. —
Encephalocraniocutaneous lipomatosis Toriello-carey syndrome
1 gene
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1 of 1 corroborated by 2+ sources
KRAS(3)
0.250 0.500 2.60e-4 6.51e-4 ✓ sig. —
12q14 microdeletion syndrome Benign epithelial tumor of salivary glands
1 gene
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1 of 1 corroborated by 2+ sources
HMGA2(2)
0.250 0.500 2.60e-4 6.51e-4 ✓ sig. —
15q13.3 microdeletion syndrome Auditory perceptual disorder
1 gene
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1 of 1 corroborated by 2+ sources
CHRNA7(5)
0.250 0.500 2.60e-4 6.51e-4 ✓ sig. —
15q13.3 microdeletion syndrome Congenital exomphalos
1 gene
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1 of 1 corroborated by 2+ sources
CHRNA7(5)
0.250 0.500 2.60e-4 6.51e-4 ✓ sig. Cluster 94 →
15q24 microdeletion Cardiac, facial, and digital anomalies with developmental delay
1 gene
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1 of 1 corroborated by 2+ sources
MEIS2(3)
0.250 0.500 2.60e-4 6.51e-4 ✓ sig. —
17p11.2 microduplication syndrome Birt-hogg-dube syndrome
1 gene
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1 of 1 corroborated by 2+ sources
FLCN(7)
0.250 0.500 2.60e-4 6.51e-4 ✓ sig. Cluster 347 →

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.