Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Cerebrooculofacioskeletal syndrome xeroderma pigmentosum group G
1 gene
Show details
1 of 1 corroborated by 2+ sources
ERCC5(7)
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. Cluster 86 →
Axenfeld-rieger syndrome IFT140-related recessive ciliopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
IFT140(2)
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. —
Carotid artery thrombosis inherited prekallikrein deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
KLKB1(3)
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. —
Cadasil inherited thrombocytopenia
1 gene
Show details
1 of 1 corroborated by 2+ sources
NOTCH3(3)
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. —
Cold paroxysmal hemoglobinuria Intellectual developmental disorder seizures dysmorphic skeletal
1 gene
Show details
1 of 1 corroborated by 2+ sources
PIGT(2)
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. —
Hemoglobinuria paroxysmal Intellectual developmental disorder seizures dysmorphic skeletal
1 gene
Show details
1 of 1 corroborated by 2+ sources
PIGT(3)
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. —
Intellectual developmental disorder seizures dysmorphic skeletal Paroxysmal nocturnal hemoglobinuria
1 gene
Show details
1 of 1 corroborated by 2+ sources
PIGT(4)
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. —
intellectual disability, autosomal recessive 61 Stuve-wiedemann syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
RUSC2(2)
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. —
interstitial lung disease due to ABCA3 deficiency Pulmonary surfactant metabolism dysfunction
1 gene
Show details
1 of 1 corroborated by 2+ sources
ABCA3(4)
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. —
Intestinal polyps Urinary bladder neck obstruction
1 gene
Show details
PTGS2(1)
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. —
Brain tumor-polyposis syndrome Intestinal polyps
1 gene
Show details
1 of 1 corroborated by 2+ sources
APC(2)
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. Cluster 41 →
Familial adenomatous polyposis Intestinal polyps
1 gene
Show details
1 of 1 corroborated by 2+ sources
APC(3)
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. Cluster 41 →
gastric adenocarcinoma and proximal polyposis of the stomach Intestinal polyps
1 gene
Show details
1 of 1 corroborated by 2+ sources
APC(2)
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. Cluster 41 →
IRF6-related condition Van der woude syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
IRF6(8)
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. —
Congenital cystic eyeball isolated microphthalmia 6
1 gene
Show details
1 of 1 corroborated by 2+ sources
PRSS56(2)
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. Cluster 56 →
Isolated somatotropin deficiency Pituitary neoplasms
1 gene
Show details
1 of 1 corroborated by 2+ sources
GH1(2)
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. Cluster 82 →
joubert syndrome 1 Penile disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
INPP5E(2)
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. —
joubert syndrome 17 Monomelic amyotrophy
1 gene
Show details
1 of 1 corroborated by 2+ sources
CPLANE1(2)
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. —
Laryngo-onycho-cutaneous syndrome Skin ulcer
1 gene
Show details
1 of 1 corroborated by 2+ sources
LAMA3(5)
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. Cluster 330 →
Cafe-au-lait spots legius syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
SPRED1(2)
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. Cluster 77 →
Clubfoot nail-patella syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
LMX1B(2)
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. Cluster 24 →
Benign infantile epilepsy neonatal encephalopathy with non-epileptic myoclonus
1 gene
Show details
1 of 1 corroborated by 2+ sources
KCNQ2(3)
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. Cluster 165 →
Hypocalcemia neonatal severe primary hyperparathyroidism
1 gene
Show details
1 of 1 corroborated by 2+ sources
CASR(7)
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. —
Choreoathetosis NKX2-1 related choreoathetosis and congenital hypothyroidism with or without pulmonary dysfunction
1 gene
Show details
1 of 1 corroborated by 2+ sources
NKX2-1(4)
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. —
46,xx ovotesticular disorder of sex development NR5A1-related sex development disorder
1 gene
Show details
1 of 1 corroborated by 2+ sources
NR5A1(2)
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. Cluster 38 →

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.