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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Auricle malformation Branchial cleft anomalies
1 gene
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KMT2D(1)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. —
Autoinflammation with arthritis and vasculitis Frontotemporal dementia with motor neuron disease
1 gene
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1 of 1 corroborated by 2+ sources
TBK1(5)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. —
Autoinflammation, panniculitis, and dermatosis syndrome, autosomal dominant Calcium metabolism disorders
1 gene
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1 of 1 corroborated by 2+ sources
OTULIN(3)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. Cluster 208 →
Autoinflammation, panniculitis, and dermatosis syndrome, autosomal recessive Calcium metabolism disorders
1 gene
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1 of 1 corroborated by 2+ sources
OTULIN(6)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. Cluster 208 →
autosomal dominant osteopetrosis 2 Osteosclerosis
1 gene
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1 of 1 corroborated by 2+ sources
CLCN7(2)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. —
Accessory skin tag autosomal recessive cutis laxa type 2A
1 gene
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1 of 1 corroborated by 2+ sources
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. —
Accessory skin tag autosomal recessive cutis laxa type 2B
1 gene
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1 of 1 corroborated by 2+ sources
PYCR1(2)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. Cluster 80 →
Accessory skin tag autosomal recessive cutis laxa type 2C
1 gene
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1 of 1 corroborated by 2+ sources
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. Cluster 80 →
Accessory skin tag autosomal recessive cutis laxa type 2D
1 gene
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1 of 1 corroborated by 2+ sources
ATP6V1A(2)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. Cluster 80 →
autosomal recessive osteopetrosis 1 Osteosclerosis
1 gene
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1 of 1 corroborated by 2+ sources
TCIRG1(2)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. —
autosomal recessive osteopetrosis 2 Osteosclerosis
1 gene
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1 of 1 corroborated by 2+ sources
TNFSF11(2)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. —
autosomal recessive osteopetrosis 4 Osteosclerosis
1 gene
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1 of 1 corroborated by 2+ sources
CLCN7(2)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. —
Adrenocortical carcinoma B-cell chronic lymphocytic leukemia
1 gene
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1 of 1 corroborated by 2+ sources
TP53(2)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. Cluster 3 →
B-cell chronic lymphocytic leukemia Choroid plexus carcinoma
1 gene
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1 of 1 corroborated by 2+ sources
TP53(2)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. Cluster 3 →
B-cell chronic lymphocytic leukemia Choroid plexus papilloma
1 gene
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1 of 1 corroborated by 2+ sources
TP53(3)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. Cluster 3 →
BAP1-related tumor predisposition syndrome Paraganglioma
1 gene
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1 of 1 corroborated by 2+ sources
BAP1(2)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. —
Bare lymphocyte syndrome Beta2-microglobulinic amyloidosis
1 gene
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B2M(1)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. —
Bare lymphocyte syndrome Hypergammaglobulinemia
1 gene
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1 of 1 corroborated by 2+ sources
B2M(2)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. —
Benign paroxysmal torticollis of infancy Episodic ataxia
1 gene
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1 of 1 corroborated by 2+ sources
CACNA1A(6)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. Cluster 61 →
Beta-ureidopropionase deficiency Cryptogenic west syndrome
1 gene
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1 of 1 corroborated by 2+ sources
UPB1(6)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. Cluster 328 →
Developmental delay with autism spectrum disorder Prader-willi syndrome
1 gene
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1 of 1 corroborated by 2+ sources
HERC2(5)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. —
Auricle malformation diamond-blackfan anemia 6
1 gene
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1 of 1 corroborated by 2+ sources
RPL5(2)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. Cluster 236 →
Digestive system neoplasms Dysferlinopathy
1 gene
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1 of 1 corroborated by 2+ sources
DYSF(3)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. —
Digestive system neoplasms H syndrome
1 gene
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1 of 1 corroborated by 2+ sources
SLC29A3(2)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. —
Digestive system neoplasms Intracranial hypertension
1 gene
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1 of 1 corroborated by 2+ sources
SLC4A10(2)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.