Gene Gene information from NCBI Gene database.
Entrez ID 29110
Gene name TANK binding kinase 1
Gene symbol TBK1
Synonyms (NCBI Gene)
AIARVFTDALS4IIAE8NAKT2K
Chromosome 12
Chromosome location 12q14.2
Summary The NF-kappa-B (NFKB) complex of proteins is inhibited by I-kappa-B (IKB) proteins, which inactivate NFKB by trapping it in the cytoplasm. Phosphorylation of serine residues on the IKB proteins by IKB kinases marks them for destruction via the ubiquitinat
SNPs SNP information provided by dbSNP.
24
SNP ID Visualize variation Clinical significance Consequence
rs55824172 C>G,T Likely-pathogenic Missense variant, non coding transcript variant, coding sequence variant
rs142030898 C>T Other, pathogenic Non coding transcript variant, stop gained, coding sequence variant
rs748112833 G>A Pathogenic Coding sequence variant, missense variant, non coding transcript variant
rs755950225 A>- Pathogenic Non coding transcript variant, frameshift variant, coding sequence variant
rs756751089 A>G Pathogenic Missense variant, non coding transcript variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
227
miRTarBase ID miRNA Experiments Reference
MIRT006971 hsa-miR-200c-3p Luciferase reporter assayWestern blot 22991189
MIRT006971 hsa-miR-200c-3p Luciferase reporter assayWestern blot 22991189
MIRT003360 hsa-miR-221-3p Reporter assay;Western blot;Microarray 20018759
MIRT053453 hsa-miR-452-5p Microarray 23807165
MIRT517392 hsa-miR-3133 PAR-CLIP 20371350
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
102
GO ID Ontology Definition Evidence Reference
GO:0000166 Function Nucleotide binding IEA
GO:0002181 Process Cytoplasmic translation IDA 8706699, 34314702
GO:0002218 Process Activation of innate immune response IBA
GO:0002218 Process Activation of innate immune response IDA 25636800
GO:0002218 Process Activation of innate immune response IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
604834 11584 ENSG00000183735
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q9UHD2
Protein name Serine/threonine-protein kinase TBK1 (EC 2.7.11.1) (NF-kappa-B-activating kinase) (T2K) (TANK-binding kinase 1)
Protein function Serine/threonine kinase that plays an essential role in regulating inflammatory responses to foreign agents (PubMed:10581243, PubMed:11839743, PubMed:12692549, PubMed:12702806, PubMed:14703513, PubMed:15367631, PubMed:15485837, PubMed:18583960,
PDB 4EFO , 4EUT , 4EUU , 4IM0 , 4IM2 , 4IM3 , 4IW0 , 4IWO , 4IWP , 4IWQ , 5EOA , 5EOF , 5EP6 , 5W5V , 6BNY , 6BOD , 6BOE , 6CQ0 , 6CQ4 , 6CQ5 , 6NT9 , 6O8B , 6RSR , 6RST , 6RSU
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00069 Pkinase 9 299 Protein kinase domain Domain
PF18396 TBK1_ULD 308 395 TANK binding kinase 1 ubiquitin-like domain Domain
PF18394 TBK1_CCD1 400 655 TANK-binding kinase 1 coiled-coil domain 1 Coiled-coil
Tissue specificity TISSUE SPECIFICITY: Ubiquitous with higher expression in testis. Expressed in the ganglion cells, nerve fiber layer and microvasculature of the retina. {ECO:0000269|PubMed:10783893, ECO:0000269|PubMed:21447600}.
Sequence
Sequence length 729
Interactions View interactions
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
36
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Amyotrophic lateral sclerosis Pathogenic; Likely pathogenic rs1592362719, rs1341055534, rs1402092579 RCV001843550
RCV003333118
RCV001843556
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Autoinflammation with arthritis and vasculitis Pathogenic rs769588220 RCV004601430
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Corticobasal syndrome Likely pathogenic rs1565825132 RCV000768401
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Encephalopathy, acute, infection-induced (herpes-specific), susceptibility to, 8 Pathogenic rs1555204731, rs1341055534 RCV001824857
RCV001196463
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
Acute myeloid leukemia Benign; Likely benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
BRAIN DISEASES Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Cervical cancer Conflicting classifications of pathogenicity; Benign; Likely benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Clear cell carcinoma of kidney Benign; Likely benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Acute monocytic leukemia Monocytic Leukemia BEFREE 30504235
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma of large intestine Colorectal Cancer UNIPROT_DG
★☆☆☆☆
Found in Text Mining only
Age related macular degeneration Age-related macular degeneration BEFREE 29864423
★☆☆☆☆
Found in Text Mining only
Alzheimer Disease Alzheimer disease Pubtator 30549411, 31824497, 39753133 Associate
★☆☆☆☆
Found in Text Mining only
Alzheimer Disease, Early Onset Alzheimer disease BEFREE 29146049
★☆☆☆☆
Found in Text Mining only
Alzheimer Disease, Late Onset Alzheimer disease BEFREE 31824497
★☆☆☆☆
Found in Text Mining only
Amyotrophic Lateral Sclerosis Amyotrophic Lateral Sclerosis BEFREE 25700176, 25803835, 25943890, 26268526, 26350399, 26476236, 26581300, 26674655, 26804609, 27156075, 27211305, 27247382, 27260353, 27538057, 27693724
View all (24 more)
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Amyotrophic Lateral Sclerosis Amyotrophic Lateral Sclerosis ORPHANET_DG 25700176
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Amyotrophic Lateral Sclerosis Amyotrophic lateral sclerosis Pubtator 25700176, 25803835, 25943890, 26365381, 26581300, 26674655, 27156075, 27247382, 28008748, 28822984, 28877469, 29146049, 30033073, 30193106, 31118040
View all (15 more)
Associate
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Amyotrophic lateral sclerosis Amyotrophic Lateral Sclerosis Orphanet
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)