Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Bilateral generalized polymicrogyria Hemimegalencephaly
1 gene
Show details
1 of 1 corroborated by 2+ sources
GRIN1(2)
0.111 0.500 9.09e-4 1.58e-3 ✓ sig. —
Cebalid syndrome Focal cortical dysplasia
1 gene
Show details
1 of 1 corroborated by 2+ sources
MTOR(3)
0.111 0.500 9.09e-4 1.58e-3 ✓ sig. —
Cebalid syndrome Hemimegalencephaly
1 gene
Show details
1 of 1 corroborated by 2+ sources
MTOR(2)
0.111 0.500 9.09e-4 1.58e-3 ✓ sig. —
Childhood-onset spinal muscular atrophy Distal muscular dystrophy
1 gene
Show details
1 of 1 corroborated by 2+ sources
BICD2(2)
0.111 0.500 9.09e-4 1.58e-3 ✓ sig. —
Diabetes mellitus ketosis prone Hepatic adenoma
1 gene
Show details
1 of 1 corroborated by 2+ sources
HNF1A(4)
0.111 0.500 9.09e-4 1.58e-3 ✓ sig. —
Cryohydrocytosis Hereditary elliptocytosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
SLC4A1(5)
0.111 0.500 9.09e-4 1.58e-3 ✓ sig. —
Hereditary motor and sensory neuropathy Nail dystrophy
1 gene
Show details
1 of 1 corroborated by 2+ sources
MFN2(4)
0.111 0.500 9.09e-4 1.58e-3 ✓ sig. —
Hypercapnia Renal hypertension
1 gene
Show details
1 of 1 corroborated by 2+ sources
NPPA(2)
0.111 0.500 9.09e-4 1.58e-3 ✓ sig. —
Deafness, sensorineural, autosomal-mitochondrial type Renal hypertension
1 gene
Show details
ND1(1)
0.111 0.500 9.09e-4 1.58e-3 ✓ sig. —
Congenital omphalocele Sacral defect
1 gene
Show details
1 of 1 corroborated by 2+ sources
PCSK5(2)
0.111 0.500 9.09e-4 1.58e-3 ✓ sig. Cluster 94 →
autosomal dominant polycystic kidney disease Saldino-mainzer syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
IFT140(3)
0.111 0.500 9.09e-4 1.58e-3 ✓ sig. Cluster 374 →
Pendred syndrome Seizures, tonic-clonic, photosensitive
1 gene
Show details
1 of 1 corroborated by 2+ sources
KCNJ10(6)
0.111 0.500 9.09e-4 1.58e-3 ✓ sig. —
Nephrosclerosis retinal dystrophy, optic nerve edema, splenomegaly, anhidrosis, and migraine headache syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
ALPK1(3)
0.067 1.000 9.09e-4 1.58e-3 ✓ sig. —
Oguchi disease retinitis pigmentosa 47
1 gene
Show details
1 of 1 corroborated by 2+ sources
SAG(7)
0.067 1.000 9.09e-4 1.58e-3 ✓ sig. Cluster 151 →
Blindness Retinitis pigmentosa with choroidal involvement
1 gene
Show details
1 of 1 corroborated by 2+ sources
RPE65(5)
0.067 1.000 9.09e-4 1.58e-3 ✓ sig. Cluster 241 →
Blindness RHO-related retinopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
RHO(2)
0.067 1.000 9.09e-4 1.58e-3 ✓ sig. —
Arrhythmogenic right ventricular dysplasia Rienhoff syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
TGFB3(2)
0.067 1.000 9.09e-4 1.58e-3 ✓ sig. —
Hemochromatosis Right ventricle hypoplasia
1 gene
Show details
1 of 1 corroborated by 2+ sources
BMP2(3)
0.067 1.000 9.09e-4 1.58e-3 ✓ sig. —
Blindness RPE65-related dominant retinopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
RPE65(3)
0.067 1.000 9.09e-4 1.58e-3 ✓ sig. Cluster 241 →
Blindness RPE65-related recessive retinopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
RPE65(3)
0.067 1.000 9.09e-4 1.58e-3 ✓ sig. Cluster 241 →
autosomal recessive limb-girdle muscular dystrophy Sarcotubular myopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
TRIM32(2)
0.067 1.000 9.09e-4 1.58e-3 ✓ sig. —
Lymphoproliferative syndrome severe combined immunodeficiency due to CD70 deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
CD70(3)
0.067 1.000 9.09e-4 1.58e-3 ✓ sig. —
Hepatic encephalopathy severe combined immunodeficiency due to DNA-PKcs deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
PRKDC(3)
0.067 1.000 9.09e-4 1.58e-3 ✓ sig. Cluster 57 →
Hyperemia severe combined immunodeficiency, autosomal recessive, T cell-negative, B cell-negative, NK cell-negative, due to adenosine deaminase deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
ADA(3)
0.067 1.000 9.09e-4 1.58e-3 ✓ sig. —
Bronchial hyperreactivity Sleep deprivation
1 gene
Show details
1 of 1 corroborated by 2+ sources
PTGS1(2)
0.067 1.000 9.09e-4 1.58e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.