Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Amenorrhea P450 oxidoreductase deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
POR(2)
0.063 1.000 9.74e-4 1.67e-3 ✓ sig. —
amyotrophic lateral sclerosis type 6 Tremor
1 gene
Show details
1 of 1 corroborated by 2+ sources
FUS(6)
0.063 1.000 9.74e-4 1.67e-3 ✓ sig. —
Anorectal malformation Urocanate hydratase deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
UROC1(8)
0.063 1.000 9.74e-4 1.67e-3 ✓ sig. Cluster 197 →
Anterior cruciate ligament injury Secondary parkinson disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
CNR2(2)
0.063 1.000 9.74e-4 1.67e-3 ✓ sig. —
Bladder exstrophy and epispadias complex Cystic kidney disease
2 genes
Show details
PKD1(1), LRRC37A2(1)
0.038 0.077 9.38e-4 1.63e-3 ✓ sig. —
Binge eating disorder Isolated systolic hypertension
1 gene
Show details
1 of 1 corroborated by 2+ sources
APOB(2)
0.111 0.500 9.09e-4 1.58e-3 ✓ sig. Cluster 140 →
Absence epilepsy Birk-barel syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
KCNK9(5)
0.111 0.500 9.09e-4 1.58e-3 ✓ sig. —
Blast crisis Hyper-igm immunodeficiency syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
AICDA(6)
0.111 0.500 9.09e-4 1.58e-3 ✓ sig. Cluster 131 →
Bloom syndrome Hyper-igm immunodeficiency syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
UNG(5)
0.111 0.500 9.09e-4 1.58e-3 ✓ sig. Cluster 131 →
Bmpr1a-related juvenile polyposis Hereditary hemorrhagic telangiectasia
1 gene
Show details
1 of 1 corroborated by 2+ sources
SMAD4(3)
0.111 0.500 9.09e-4 1.58e-3 ✓ sig. —
15q13.3 microdeletion syndrome Congenital omphalocele
1 gene
Show details
1 of 1 corroborated by 2+ sources
CHRNA7(5)
0.111 0.500 9.09e-4 1.58e-3 ✓ sig. Cluster 94 →
Acrodysostosis Carney complex
1 gene
Show details
1 of 1 corroborated by 2+ sources
PRKAR1A(8)
0.111 0.500 9.09e-4 1.58e-3 ✓ sig. —
Anaptoglobinemia Sensory peripheral neuropathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
ATP7B(2)
0.111 0.500 9.09e-4 1.58e-3 ✓ sig. —
Conjunctivitis Skin hair eye pigmentation variation
1 gene
Show details
1 of 1 corroborated by 2+ sources
HERC2(2)
0.111 0.500 9.09e-4 1.58e-3 ✓ sig. —
Continuous spike and wave during slow wave sleep syndrome Familial temporal lobe epilepsy
1 gene
Show details
GRIN2A(1)
0.111 0.500 9.09e-4 1.58e-3 ✓ sig. —
Cortical occipital malformations Focal cortical dysplasia
1 gene
Show details
TBR1(1)
0.111 0.500 9.09e-4 1.58e-3 ✓ sig. —
Congenital omphalocele Currarino syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
PCSK5(2)
0.111 0.500 9.09e-4 1.58e-3 ✓ sig. Cluster 94 →
Congenital septal defect of heart Currarino syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
PCSK5(2)
0.111 0.500 9.09e-4 1.58e-3 ✓ sig. —
Cerebral atrophy Deoxyguanosine kinase deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
DGUOK(2)
0.111 0.500 9.09e-4 1.58e-3 ✓ sig. —
Familial temporal lobe epilepsy lissencephaly with cerebellar hypoplasia
1 gene
Show details
1 of 1 corroborated by 2+ sources
RELN(5)
0.111 0.500 9.09e-4 1.58e-3 ✓ sig. —
17q12 microdeletion syndrome Mayer-rokitansky-kuster-hauser syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
HNF1B(2)
0.111 0.500 9.09e-4 1.58e-3 ✓ sig. Cluster 23 →
Pendred syndrome Usher syndrome type 1
1 gene
Show details
1 of 1 corroborated by 2+ sources
MYO7A(2)
0.111 0.500 9.09e-4 1.58e-3 ✓ sig. —
Gingival diseases Ventricular tachycardia
1 gene
Show details
1 of 1 corroborated by 2+ sources
ABCA5(4)
0.111 0.500 9.09e-4 1.58e-3 ✓ sig. —
Congenital septal defect of heart Vertebral anomalies with endocrine and t-cell dysfunction
1 gene
Show details
1 of 1 corroborated by 2+ sources
TBX2(5)
0.111 0.500 9.09e-4 1.58e-3 ✓ sig. —
Congenital deformity of clavicle X-linked centronuclear myopathy
1 gene
Show details
DNM2(1)
0.111 0.500 9.09e-4 1.58e-3 ✓ sig. Cluster 59 →

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.