Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Lymphedema microcephaly with or without chorioretinopathy, lymphedema, or intellectual disability
1 gene
Show details
1 of 1 corroborated by 2+ sources
KIF11(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Congenital total cataract Microstomia
1 gene
Show details
LEMD2(1)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Congenital anomaly of limb Middle lobe syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
SALL1(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Middle lobe syndrome Vacterl association
1 gene
Show details
SALL1(1)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Minor epilepsy Seasonal affective disorder
1 gene
Show details
NPY(1)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Mitochondrial encephalocardiomyopathy Mitochondrial encephalomyopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
TMEM70(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. Cluster 50 →
Childhood myocerebrohepatopathy spectrum Mitochondrial encephalomyopathy
1 gene
Show details
POLG(1)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Loeys-dietz syndrome multiple self-healing squamous epithelioma
1 gene
Show details
1 of 1 corroborated by 2+ sources
TGFBR1(6)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
muscular dystrophy-dystroglycanopathy Walker-warburg syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
LARGE1(4)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. Cluster 14 →
muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a, 11 Walker-warburg syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A13 Walker-warburg syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
B4GAT1(4)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. Cluster 14 →
Hydrops fetalis myasthenic syndrome, congenital, 1b, fast-channel
1 gene
Show details
1 of 1 corroborated by 2+ sources
CHRNA1(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Gliosarcoma P450 oxidoreductase deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
POR(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Congenital total cataract Palmoplantar keratoderma and congenital alopecia
1 gene
Show details
1 of 1 corroborated by 2+ sources
LSS(3)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Distal arthrogryposis papillary renal cell carcinoma
1 gene
Show details
1 of 1 corroborated by 2+ sources
MET(5)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Lymphedema papillary renal cell carcinoma
1 gene
Show details
1 of 1 corroborated by 2+ sources
MET(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Distal arthrogryposis Perching syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
KLHL7(4)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Dental enamel hypoplasia Peripheral neuropathy myopathy hoarseness hearing loss syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
MYH14(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Dental enamel hypoplasia Peripheral neuropathy, myopathy, hoarseness, and hearing
1 gene
Show details
1 of 1 corroborated by 2+ sources
MYH14(5)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Peters plus syndrome Primary aldosteronism
1 gene
Show details
1 of 1 corroborated by 2+ sources
B3GLCT(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. Cluster 143 →
Distal arthrogryposis peutz-jeghers syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
STK11(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Coronary stenosis PLD1-related congenital heart disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
PLD1(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Pheochromocytoma Polydactyly-macrocephaly syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
MAX(5)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. Cluster 81 →
Developmental delay with autism spectrum disorder Primary angle closure glaucoma
1 gene
Show details
1 of 1 corroborated by 2+ sources
HERC2(4)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Primary aldosteronism Primary hyperaldosteronism-seizures-neurological abnormalities syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
CACNA1D(3)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.