Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
myopathy caused by variation in CRPPA Walker-warburg syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
CRPPA(4)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. Cluster 14 →
myopathy caused by variation in FKRP Walker-warburg syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
FKRP(4)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. Cluster 14 →
myopathy caused by variation in FKTN Walker-warburg syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
FKTN(4)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. Cluster 14 →
myopathy caused by variation in GMPPB Walker-warburg syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
GMPPB(3)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. Cluster 14 →
myopathy caused by variation in POMGNT1 Walker-warburg syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
POMGNT1(4)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. Cluster 14 →
myopathy caused by variation in POMGNT2 Walker-warburg syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
POMGNT2(4)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. Cluster 14 →
myopathy caused by variation in POMT1 Walker-warburg syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
POMT1(4)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. Cluster 14 →
myopathy caused by variation in POMT2 Walker-warburg syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
POMT2(4)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. Cluster 14 →
Nasal obstruction Seasonal affective disorder
1 gene
Show details
1 of 1 corroborated by 2+ sources
NPY(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Neonatal diabetes-congenital hypothyroidism-congenital glaucoma-hepatic fibrosis-polycystic kidney syndrome Primary angle closure glaucoma
1 gene
Show details
1 of 1 corroborated by 2+ sources
GLIS3(3)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Microform holoprosencephaly neurodevelopmental disorder with nonspecific brain abnormalities and with or without seizures
1 gene
Show details
1 of 1 corroborated by 2+ sources
DLL1(3)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. Cluster 96 →
neuromuscular disease caused by qualitative or quantitative defects of alpha-dystroglycan Walker-warburg syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
DAG1(4)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. Cluster 14 →
norrie disease Primary aldosteronism
1 gene
Show details
1 of 1 corroborated by 2+ sources
NDP(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Hydrops fetalis obsolete PIEZO1-related generalized lymphatic dysplasia with non-immune hydrops fetalis
1 gene
Show details
1 of 1 corroborated by 2+ sources
PIEZO1(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Distal arthrogryposis Osteofibrous dysplasia
1 gene
Show details
1 of 1 corroborated by 2+ sources
MET(6)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Lymphedema Osteofibrous dysplasia
1 gene
Show details
1 of 1 corroborated by 2+ sources
MET(5)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
20p12.3 microdeletion syndrome Patent ductus arteriosus
1 gene
Show details
1 of 1 corroborated by 2+ sources
BMP2(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
22q11 deletion syndrome Microform holoprosencephaly
1 gene
Show details
1 of 1 corroborated by 2+ sources
FGF8(3)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. Cluster 96 →
Aldosterone-producing adenoma Primary aldosteronism
1 gene
Show details
1 of 1 corroborated by 2+ sources
CACNA1D(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Alveolar capillary dysplasia Vacterl association
1 gene
Show details
1 of 1 corroborated by 2+ sources
FOXF1(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Anomalous pulmonary venous Patent ductus arteriosus
1 gene
Show details
PSMC3(1)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Anterior cruciate ligament injury Catalepsy
1 gene
Show details
1 of 1 corroborated by 2+ sources
CNR2(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Anterior pituitary function deficiency with variable immunodeficiency Developmental disorder
1 gene
Show details
1 of 1 corroborated by 2+ sources
NFKB2(3)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Hydrops fetalis immune dysregulation-polyendocrinopathy-enteropathy-X-linked syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
FOXP3(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Ichthyosis immunodeficiency 63 with lymphoproliferation and autoimmunity
1 gene
Show details
1 of 1 corroborated by 2+ sources
IL2RB(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.