Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
ALG9-associated autosomal dominant polycystic kidney disease Polycystic liver disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
ALG9(2)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. Cluster 23 →
amyotrophic lateral sclerosis, susceptibility to, 24 Short-rib thoracic dysplasia
1 gene
Show details
1 of 1 corroborated by 2+ sources
NEK1(5)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. Cluster 22 →
Anterior segment dysgenesis anterior segment dysgenesis 7
1 gene
Show details
1 of 1 corroborated by 2+ sources
PXDN(4)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. —
Anterior segment dysgenesis anterior segment dysgenesis 8
1 gene
Show details
1 of 1 corroborated by 2+ sources
CPAMD8(5)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. —
Maturity-onset diabetes of the young (mody) Pancreatic beta-cell agenesis with neonatal diabetes mellitus
1 gene
Show details
PTF1A(1)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. —
polycystic kidney disease 3 with or without polycystic liver disease Polycystic liver disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
GANAB(2)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. Cluster 23 →
Polycystic liver disease polycystic liver disease 1
1 gene
Show details
1 of 1 corroborated by 2+ sources
PRKCSH(6)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. Cluster 23 →
Polycystic liver disease polycystic liver disease 2
1 gene
Show details
1 of 1 corroborated by 2+ sources
SEC63(6)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. Cluster 23 →
Congenital impairment of spermatozoa motility primary ciliary dyskinesia 21
1 gene
Show details
1 of 1 corroborated by 2+ sources
DRC1(2)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. —
pycnodysostosis Skeletal dysplasia
1 gene
Show details
1 of 1 corroborated by 2+ sources
CTSK(2)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. —
Charcot-Marie-Tooth disease axonal type 2N Congenital clubfoot
1 gene
Show details
1 of 1 corroborated by 2+ sources
AARS1(2)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. —
Childhood-onset basal ganglia degeneration syndrome Diffuse cutaneous systemic sclerosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
VAC14(3)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. —
Anti-neutrophil antibody associated vasculitis Chromosome xq27.3-q28 duplication syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
FMR1(2)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. —
ciliary dyskinesia, primary, 41 Nasal disorder
1 gene
Show details
1 of 1 corroborated by 2+ sources
GAS2L2(2)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. Cluster 137 →
Combined immunodeficiency-lymphopenia-cancer predisposing syndrome due to aiolos deficiency Nasal disorder
1 gene
Show details
1 of 1 corroborated by 2+ sources
IKZF3(2)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. —
Anterior segment dysgenesis Congenital cataract anterior segment dysgenesis syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
PITX3(5)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. —
Anterior segment dysgenesis Congenital cornea plana
1 gene
Show details
1 of 1 corroborated by 2+ sources
KERA(2)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. —
Anterior segment dysgenesis Congenital malformation of cornea
1 gene
Show details
KERA(1)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. —
Congenital clubfoot Leukoencephalopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
AARS1(3)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. —
Bullous pemphigoid Majeed syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
LPIN2(7)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. —
Maturity-onset diabetes of the young (mody) maturity-onset diabetes of the young type 8
1 gene
Show details
1 of 1 corroborated by 2+ sources
CEL(7)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. —
mucopolysaccharidosis type 4A Skeletal dysplasia
1 gene
Show details
1 of 1 corroborated by 2+ sources
GALNS(2)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. —
Diffuse cutaneous systemic sclerosis multiple self-healing squamous epithelioma
1 gene
Show details
1 of 1 corroborated by 2+ sources
TGFBR1(2)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. Cluster 25 →
MYPN-related myopathy Restrictive cardiomyopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
MYPN(4)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. —
Congenital clubfoot nail-patella syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
LMX1B(2)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. Cluster 24 →

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.