Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Costello syndrome Noonan syndrome-like disorder with loose anagen hair
1 gene
Show details
1 of 1 corroborated by 2+ sources
SHOC2(2)
0.067 0.500 1.69e-3 2.53e-3 ✓ sig. Cluster 42 →
Cerebral folate deficiency Congenital abnormalities
1 gene
Show details
1 of 1 corroborated by 2+ sources
FOLR1(3)
0.067 0.500 1.69e-3 2.53e-3 ✓ sig. —
Chronic progressive external ophthalmoplegia Progressive external ophthalmoplegia
1 gene
Show details
1 of 1 corroborated by 2+ sources
RRM2B(4)
0.067 0.500 1.69e-3 2.53e-3 ✓ sig. —
Birt-hogg-dube syndrome Omphalocele exstrophy imperforate anus
1 gene
Show details
1 of 1 corroborated by 2+ sources
FLCN(7)
0.067 0.500 1.69e-3 2.53e-3 ✓ sig. —
Blepharitis Oculocutaneous albinism
1 gene
Show details
1 of 1 corroborated by 2+ sources
MC1R(5)
0.067 0.500 1.69e-3 2.53e-3 ✓ sig. —
Breast fibrocystic disease Vertebral column disorder
1 gene
Show details
CSMD1(1)
0.067 0.500 1.69e-3 2.53e-3 ✓ sig. —
Essential thrombocythemia Hemorrhagic stroke
1 gene
Show details
1 of 1 corroborated by 2+ sources
PDGFA(3)
0.067 0.500 1.69e-3 2.53e-3 ✓ sig. —
Hereditary folate malabsorption Hyperhomocysteinemia
1 gene
Show details
1 of 1 corroborated by 2+ sources
SLC46A1(4)
0.067 0.500 1.69e-3 2.53e-3 ✓ sig. —
Basal ganglia disease Hyperferritinemia
1 gene
Show details
1 of 1 corroborated by 2+ sources
FTL(3)
0.067 0.500 1.69e-3 2.53e-3 ✓ sig. —
Congenital abnormalities Townes-brocks syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
SALL1(7)
0.067 0.500 1.69e-3 2.53e-3 ✓ sig. —
Congenital abnormalities Xq27.3 q28 duplication syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
FMR1(3)
0.067 0.500 1.69e-3 2.53e-3 ✓ sig. —
Cortisone reductase deficiency Omphalocele exstrophy imperforate anus
1 gene
Show details
1 of 1 corroborated by 2+ sources
HSD11B1(5)
0.067 0.500 1.69e-3 2.53e-3 ✓ sig. —
Constitutional mismatch repair deficiency Cystic leukoencephalopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
RNASET2(4)
0.067 0.500 1.69e-3 2.53e-3 ✓ sig. Cluster 166 →
Discoid lupus erythematosus Motor skills disorder
1 gene
Show details
1 of 1 corroborated by 2+ sources
OGG1(2)
0.067 0.500 1.69e-3 2.53e-3 ✓ sig. —
Discoid lupus erythematosus Senile cataract
1 gene
Show details
OGG1(1)
0.067 0.500 1.69e-3 2.53e-3 ✓ sig. —
Dna repair-deficiency disorders Senile cataract
1 gene
Show details
1 of 1 corroborated by 2+ sources
WRN(2)
0.067 0.500 1.69e-3 2.53e-3 ✓ sig. —
Dysautonomia Pruritus
1 gene
Show details
1 of 1 corroborated by 2+ sources
TPSAB1(2)
0.067 0.500 1.69e-3 2.53e-3 ✓ sig. —
Eosinophilic leukemia Thyroid gland neoplasms
1 gene
Show details
1 of 1 corroborated by 2+ sources
PDGFRA(2)
0.067 0.500 1.69e-3 2.53e-3 ✓ sig. —
developmental and epileptic encephalopathy, 29 Leukodystrophy
1 gene
Show details
1 of 1 corroborated by 2+ sources
AARS1(2)
0.037 1.000 1.69e-3 2.53e-3 ✓ sig. —
Amino acid metabolism disorder Developmental delay due to metabolic enzyme deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
ALDH6A1(3)
0.037 1.000 1.69e-3 2.53e-3 ✓ sig. —
Developmental delay with dysmorphic facies and brain anomalies Leukodystrophy
1 gene
Show details
1 of 1 corroborated by 2+ sources
U2AF2(4)
0.037 1.000 1.69e-3 2.53e-3 ✓ sig. Cluster 100 →
Dihydropyrimidine dehydrogenase deficiency Language development disorders
1 gene
Show details
1 of 1 corroborated by 2+ sources
DPYD(6)
0.037 1.000 1.69e-3 2.53e-3 ✓ sig. —
Cardiac arrest dilated cardiomyopathy 1BB
1 gene
Show details
1 of 1 corroborated by 2+ sources
DSG2(2)
0.037 1.000 1.69e-3 2.53e-3 ✓ sig. Cluster 4 →
Dkc1-related disorder Dyskeratosis congenita
1 gene
Show details
1 of 1 corroborated by 2+ sources
DKC1(7)
0.037 1.000 1.69e-3 2.53e-3 ✓ sig. Cluster 64 →
Cardiac arrest duane retraction syndrome 2
1 gene
Show details
1 of 1 corroborated by 2+ sources
CHN1(2)
0.037 1.000 1.69e-3 2.53e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.