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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
spermatogenic failure 18 Teratozoospermia
1 gene
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1 of 1 corroborated by 2+ sources
DNAH1(2)
0.036 1.000 1.75e-3 2.61e-3 ✓ sig. —
spermatogenic failure 38 Teratozoospermia
1 gene
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1 of 1 corroborated by 2+ sources
ARMC2(2)
0.036 1.000 1.75e-3 2.61e-3 ✓ sig. Cluster 31 →
spermatogenic failure 56 Teratozoospermia
1 gene
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1 of 1 corroborated by 2+ sources
DNAH10(2)
0.036 1.000 1.75e-3 2.61e-3 ✓ sig. —
Hashimoto disease spinocerebellar ataxia type 2
1 gene
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1 of 1 corroborated by 2+ sources
ATXN2(2)
0.036 1.000 1.75e-3 2.61e-3 ✓ sig. —
spinocerebellar ataxia, autosomal recessive 25 Teratozoospermia
1 gene
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1 of 1 corroborated by 2+ sources
ATG5(3)
0.036 1.000 1.75e-3 2.61e-3 ✓ sig. —
Hashimoto disease Striatal neurodegeneration
1 gene
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1 of 1 corroborated by 2+ sources
PDE8B(4)
0.036 1.000 1.75e-3 2.61e-3 ✓ sig. —
Sezary syndrome T-B+ severe combined immunodeficiency due to gamma chain deficiency
1 gene
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1 of 1 corroborated by 2+ sources
IL2RG(2)
0.036 1.000 1.75e-3 2.61e-3 ✓ sig. —
congenital myopathy with myasthenic-like onset Rhabdomyosarcoma
1 gene
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1 of 1 corroborated by 2+ sources
PAX7(3)
0.036 1.000 1.75e-3 2.61e-3 ✓ sig. —
Cortical development malformation Dicarboxylic aminoaciduria
1 gene
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1 of 1 corroborated by 2+ sources
SLC1A1(7)
0.036 1.000 1.75e-3 2.61e-3 ✓ sig. —
Dicer1 syndrome Rhabdomyosarcoma
1 gene
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1 of 1 corroborated by 2+ sources
DICER1(7)
0.036 1.000 1.75e-3 2.61e-3 ✓ sig. —
Dyschromatosis Hepatolenticular degeneration
1 gene
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SASH1(1)
0.036 1.000 1.75e-3 2.61e-3 ✓ sig. —
Bladder exstrophy and epispadias complex ectodermal dysplasia WNT10A related
1 gene
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1 of 1 corroborated by 2+ sources
WNT10A(2)
0.036 1.000 1.75e-3 2.61e-3 ✓ sig. —
Methylmalonic acidemia thrombocytopenia 4
1 gene
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1 of 1 corroborated by 2+ sources
CYCS(3)
0.036 1.000 1.75e-3 2.61e-3 ✓ sig. —
Teratozoospermia TTLL5-related retinopathy
1 gene
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1 of 1 corroborated by 2+ sources
TTLL5(2)
0.036 1.000 1.75e-3 2.61e-3 ✓ sig. —
Rhabdomyosarcoma Uveal coloboma-cleft lip and palate-intellectual disability
1 gene
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1 of 1 corroborated by 2+ sources
YAP1(5)
0.036 1.000 1.75e-3 2.61e-3 ✓ sig. —
Cortical development malformation X-linked dominant chondrodysplasia chassaing-lacombe type
1 gene
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1 of 1 corroborated by 2+ sources
HDAC6(4)
0.036 1.000 1.75e-3 2.61e-3 ✓ sig. —
Teratozoospermia X-linked intellectual disability, Cabezas type
1 gene
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1 of 1 corroborated by 2+ sources
CUL4B(2)
0.036 1.000 1.75e-3 2.61e-3 ✓ sig. Cluster 31 →
Sezary syndrome X-linked severe combined immunodeficiency
1 gene
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1 of 1 corroborated by 2+ sources
IL2RG(2)
0.036 1.000 1.75e-3 2.61e-3 ✓ sig. —
Cervicitis Sezary syndrome
1 gene
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1 of 1 corroborated by 2+ sources
IL32(2)
0.036 1.000 1.75e-3 2.61e-3 ✓ sig. Cluster 3 →
Chromosome 16p13.3 deletion syndrome Sezary syndrome
1 gene
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1 of 1 corroborated by 2+ sources
CREBBP(2)
0.036 1.000 1.75e-3 2.61e-3 ✓ sig. —
ciliary dyskinesia, primary, 45 Teratozoospermia
1 gene
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1 of 1 corroborated by 2+ sources
TTC12(2)
0.036 1.000 1.75e-3 2.61e-3 ✓ sig. Cluster 31 →
ciliary dyskinesia, primary, 47, and lissencephaly Rhabdomyosarcoma
1 gene
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1 of 1 corroborated by 2+ sources
TP73(2)
0.036 1.000 1.75e-3 2.61e-3 ✓ sig. Cluster 166 →
Cobalamin metabolism disorder Methylmalonic acidemia
1 gene
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1 of 1 corroborated by 2+ sources
MMADHC(6)
0.036 1.000 1.75e-3 2.61e-3 ✓ sig. —
Bladder exstrophy and epispadias complex gapo syndrome
1 gene
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1 of 1 corroborated by 2+ sources
ANTXR1(2)
0.036 1.000 1.75e-3 2.61e-3 ✓ sig. —
glycogen storage disease I Hypoglycemia
1 gene
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1 of 1 corroborated by 2+ sources
G6PC1(2)
0.036 1.000 1.75e-3 2.61e-3 ✓ sig. Cluster 36 →

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.