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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
mitochondrial short-chain enoyl-coa hydratase 1 deficiency Obesity
1 gene
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1 of 1 corroborated by 2+ sources
ECHS1(3)
0.001 1.000 7.75e-2 7.87e-2 —
BBS4-related ciliopathy Obesity
1 gene
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1 of 1 corroborated by 2+ sources
BBS4(2)
0.001 1.000 7.75e-2 7.87e-2 —
Obesity White blood cell count quantitative trait locus
1 gene
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1 of 1 corroborated by 2+ sources
ACKR1(2)
0.001 1.000 7.75e-2 7.87e-2 —
Developmental delay due to metabolic enzyme deficiency Obesity
1 gene
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1 of 1 corroborated by 2+ sources
ALDH6A1(3)
0.001 1.000 7.75e-2 7.87e-2 —
Essential pentosuria Obesity
1 gene
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1 of 1 corroborated by 2+ sources
DCXR(3)
0.001 1.000 7.75e-2 7.87e-2 —
Obesity Spasticity with hyperglycinemia
1 gene
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1 of 1 corroborated by 2+ sources
GLRX5(3)
0.001 1.000 7.75e-2 7.87e-2 —
congenital disorder of glycosylation, type 2v Obesity
1 gene
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1 of 1 corroborated by 2+ sources
EDEM3(2)
0.001 1.000 7.75e-2 7.87e-2 —
congenital disorder of glycosylation with defective fucosylation 2 Obesity
1 gene
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1 of 1 corroborated by 2+ sources
FCSK(2)
0.001 1.000 7.75e-2 7.87e-2 —
Combined immunodeficiency with autoimmunity and spondylometaphyseal dysplasia Obesity
1 gene
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1 of 1 corroborated by 2+ sources
ACP5(2)
0.001 1.000 7.75e-2 7.87e-2 —
Obesity opsismodysplasia
1 gene
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1 of 1 corroborated by 2+ sources
INPPL1(2)
0.001 1.000 7.75e-2 7.87e-2 Cluster 2 →
NACC1-related neurodevelopmental disorder with epilepsy, cataracts and episodic irritability Obesity
1 gene
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1 of 1 corroborated by 2+ sources
NACC1(2)
0.001 1.000 7.75e-2 7.87e-2 —
Nasopalpebral lipoma-coloboma syndrome Obesity
1 gene
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1 of 1 corroborated by 2+ sources
ZDBF2(3)
0.001 1.000 7.75e-2 7.87e-2 —
Dalmatian hypouricemia Obesity
1 gene
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1 of 1 corroborated by 2+ sources
0.001 1.000 7.75e-2 7.87e-2 —
Alopecia universalis Obesity
1 gene
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HR(1)
0.001 1.000 7.75e-2 7.87e-2 —
Isobutyryl-coa dehydrogenase deficiency Obesity
1 gene
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1 of 1 corroborated by 2+ sources
ACAD8(3)
0.001 1.000 7.75e-2 7.87e-2 —
inflammatory bowel disease 28 Obesity
1 gene
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1 of 1 corroborated by 2+ sources
IL10RA(2)
0.001 1.000 7.75e-2 7.87e-2 —
immunodeficiency 72 with autoinflammation Obesity
1 gene
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1 of 1 corroborated by 2+ sources
NCKAP1L(2)
0.001 1.000 7.75e-2 7.87e-2 —
Androgenetic alopecia Thiamine-responsive maple syrup urine disease
1 gene
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1 of 1 corroborated by 2+ sources
BCKDHA(2)
0.002 0.333 7.74e-2 7.87e-2 —
Acral peeling skin syndrome Glioblastoma
1 gene
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1 of 1 corroborated by 2+ sources
CSTA(2)
0.002 0.500 7.73e-2 7.86e-2 —
Birk-aharoni syndrome Dementia
1 gene
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1 of 1 corroborated by 2+ sources
PSMC1(3)
0.002 0.500 7.52e-2 7.64e-2 Cluster 2 →
Hypertension immunodeficiency-centromeric instability-facial anomalies syndrome 4
1 gene
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1 of 1 corroborated by 2+ sources
HELLS(2)
0.001 1.000 7.46e-2 7.59e-2 —
Hypertension Primary hypomagnesemia with hypocalciuria
1 gene
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1 of 1 corroborated by 2+ sources
FXYD2(3)
0.001 1.000 7.46e-2 7.59e-2 —
Hypertension LIPE-related familial partial lipodystrophy
1 gene
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1 of 1 corroborated by 2+ sources
LIPE(2)
0.001 1.000 7.46e-2 7.59e-2 —
Hypertension MPI-congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
MPI(2)
0.001 1.000 7.46e-2 7.59e-2 —
Arthrogryposis with anterior horn cell disease Hypertension
1 gene
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1 of 1 corroborated by 2+ sources
GLE1(2)
0.001 1.000 7.46e-2 7.59e-2 —

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.