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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
immunodeficiency 72 with autoinflammation Obesity
1 gene
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1 of 1 corroborated by 2+ sources
NCKAP1L(2)
0.001 1.000 7.75e-2 7.87e-2 —
inflammatory bowel disease 28 Obesity
1 gene
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1 of 1 corroborated by 2+ sources
IL10RA(2)
0.001 1.000 7.75e-2 7.87e-2 —
Isobutyryl-coa dehydrogenase deficiency Obesity
1 gene
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1 of 1 corroborated by 2+ sources
ACAD8(3)
0.001 1.000 7.75e-2 7.87e-2 —
Dalmatian hypouricemia Obesity
1 gene
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1 of 1 corroborated by 2+ sources
0.001 1.000 7.75e-2 7.87e-2 —
medium chain acyl-coa dehydrogenase deficiency Obesity
1 gene
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1 of 1 corroborated by 2+ sources
ACADM(3)
0.001 1.000 7.75e-2 7.87e-2 —
methylmalonate semialdehyde dehydrogenase deficiency Obesity
1 gene
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1 of 1 corroborated by 2+ sources
ALDH6A1(3)
0.001 1.000 7.75e-2 7.87e-2 —
mitochondrial short-chain enoyl-coa hydratase 1 deficiency Obesity
1 gene
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1 of 1 corroborated by 2+ sources
ECHS1(3)
0.001 1.000 7.75e-2 7.87e-2 —
Essential pentosuria Obesity
1 gene
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1 of 1 corroborated by 2+ sources
DCXR(3)
0.001 1.000 7.75e-2 7.87e-2 —
Obesity Pancreatic beta-cell agenesis with neonatal diabetes mellitus
1 gene
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1 of 1 corroborated by 2+ sources
PTF1A(2)
0.001 1.000 7.75e-2 7.87e-2 —
Obesity PLIN1-related familial partial lipodystrophy
1 gene
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1 of 1 corroborated by 2+ sources
PLIN1(3)
0.001 1.000 7.75e-2 7.87e-2 —
Alopecia universalis Obesity
1 gene
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HR(1)
0.001 1.000 7.75e-2 7.87e-2 —
BBS4-related ciliopathy Obesity
1 gene
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1 of 1 corroborated by 2+ sources
BBS4(2)
0.001 1.000 7.75e-2 7.87e-2 —
hawkinsinuria Obesity
1 gene
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1 of 1 corroborated by 2+ sources
HPD(2)
0.001 1.000 7.75e-2 7.87e-2 —
Hyperinflammatory lymphoproliferative immunodeficiency Obesity
1 gene
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1 of 1 corroborated by 2+ sources
NCKAP1L(2)
0.001 1.000 7.75e-2 7.87e-2 —
NACC1-related neurodevelopmental disorder with epilepsy, cataracts and episodic irritability Obesity
1 gene
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1 of 1 corroborated by 2+ sources
NACC1(2)
0.001 1.000 7.75e-2 7.87e-2 —
Nasopalpebral lipoma-coloboma syndrome Obesity
1 gene
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1 of 1 corroborated by 2+ sources
ZDBF2(3)
0.001 1.000 7.75e-2 7.87e-2 —
Obesity opsismodysplasia
1 gene
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1 of 1 corroborated by 2+ sources
INPPL1(2)
0.001 1.000 7.75e-2 7.87e-2 Cluster 2 →
Developmental delay due to metabolic enzyme deficiency Obesity
1 gene
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1 of 1 corroborated by 2+ sources
ALDH6A1(3)
0.001 1.000 7.75e-2 7.87e-2 —
Obesity Spasticity with hyperglycinemia
1 gene
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1 of 1 corroborated by 2+ sources
GLRX5(3)
0.001 1.000 7.75e-2 7.87e-2 —
Progressive arterial occlusive disease with hypertension Ulcerative colitis
1 gene
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1 of 1 corroborated by 2+ sources
DAP3(2)
0.002 0.500 7.78e-2 7.90e-2 —
Bipolar disorder glycogen storage disease III
1 gene
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1 of 1 corroborated by 2+ sources
AGL(2)
0.001 1.000 7.92e-2 8.03e-2 —
Bipolar disorder combined immunodeficiency due to STK4 deficiency
1 gene
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1 of 1 corroborated by 2+ sources
STK4(4)
0.001 1.000 7.92e-2 8.03e-2 —
Bipolar disorder congenital disorder of glycosylation, type Iw, autosomal dominant
1 gene
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1 of 1 corroborated by 2+ sources
STT3A(2)
0.001 1.000 7.92e-2 8.03e-2 —
Bipolar disorder Congenital intrinsic factor deficiency
1 gene
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1 of 1 corroborated by 2+ sources
CBLIF(2)
0.001 1.000 7.92e-2 8.03e-2 —
Bipolar disorder Cayman type cerebellar ataxia
1 gene
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1 of 1 corroborated by 2+ sources
ATCAY(2)
0.001 1.000 7.92e-2 8.03e-2 —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.