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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Acetyl-coa carboxylase deficiency Heart failure
1 gene
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1 of 1 corroborated by 2+ sources
ACACA(3)
0.002 1.000 3.05e-2 3.24e-2 ✓ sig. —
Heart failure PHIP-related behavioral problems-intellectual disability-obesity-dysmorphic features syndrome
1 gene
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1 of 1 corroborated by 2+ sources
PHIP(2)
0.002 1.000 3.05e-2 3.24e-2 ✓ sig. —
Heart failure phosphoenolpyruvate carboxykinase deficiency, cytosolic
1 gene
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1 of 1 corroborated by 2+ sources
PCK1(3)
0.002 1.000 3.05e-2 3.24e-2 ✓ sig. —
Heart failure pseudohypoaldosteronism type 2D
1 gene
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1 of 1 corroborated by 2+ sources
KLHL3(2)
0.002 1.000 3.05e-2 3.24e-2 ✓ sig. —
Heart failure Hmg-coa synthase deficiency
1 gene
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1 of 1 corroborated by 2+ sources
HMGCS2(4)
0.002 1.000 3.05e-2 3.24e-2 ✓ sig. —
Diabetes mellitus type 1 hyperphosphatasia with intellectual disability syndrome 4
1 gene
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1 of 1 corroborated by 2+ sources
PGAP3(2)
0.002 1.000 3.10e-2 3.29e-2 ✓ sig. —
Diabetes mellitus type 1 Diaphanospondylodysostosis
1 gene
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1 of 1 corroborated by 2+ sources
BMPER(6)
0.002 1.000 3.10e-2 3.29e-2 ✓ sig. —
Diabetes mellitus type 1 Intellectual developmental disorder neuropsychiatric
1 gene
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1 of 1 corroborated by 2+ sources
SLC45A1(4)
0.002 1.000 3.10e-2 3.29e-2 ✓ sig. —
Diabetes mellitus type 1 Thoracic malformation
1 gene
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1 of 1 corroborated by 2+ sources
FGF4(3)
0.002 1.000 3.10e-2 3.29e-2 ✓ sig. —
Diabetes mellitus type 1 Pemphigus foliaceus
1 gene
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1 of 1 corroborated by 2+ sources
RAN(2)
0.002 1.000 3.10e-2 3.29e-2 ✓ sig. —
Diabetes mellitus type 1 PGM1-congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
PGM1(2)
0.002 1.000 3.10e-2 3.29e-2 ✓ sig. —
Diabetes mellitus type 1 NIK deficiency
1 gene
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1 of 1 corroborated by 2+ sources
MAP3K14(2)
0.002 1.000 3.10e-2 3.29e-2 ✓ sig. —
Diabetes mellitus type 1 MAN1B1-congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
MAN1B1(2)
0.002 1.000 3.10e-2 3.29e-2 ✓ sig. —
Diabetes mellitus type 1 maturity-onset diabetes of the young type 8
1 gene
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1 of 1 corroborated by 2+ sources
CEL(3)
0.002 1.000 3.10e-2 3.29e-2 ✓ sig. —
Diabetes mellitus type 1 Mineralocortocoid excess
1 gene
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1 of 1 corroborated by 2+ sources
HSD11B2(7)
0.002 1.000 3.10e-2 3.29e-2 ✓ sig. —
Early-onset progressive encephalopathy-hearing loss-pons hypoplasia-brain atrophy syndrome Mitochondrial disease
1 gene
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1 of 1 corroborated by 2+ sources
LIPT2(3)
0.004 0.500 3.12e-2 3.31e-2 ✓ sig. —
Mitochondrial disease Sandhoff disease
1 gene
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GFM2(1)
0.004 0.500 3.12e-2 3.31e-2 ✓ sig. Cluster 50 →
3-methylcrotonyl-coa carboxylase deficiency Mitochondrial disease
1 gene
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1 of 1 corroborated by 2+ sources
MCCC2(4)
0.004 0.500 3.12e-2 3.31e-2 ✓ sig. —
Cardiomyopathy Congenital chronic diarrhea with protein-losing enteropathy
1 gene
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1 of 1 corroborated by 2+ sources
DGAT1(2)
0.004 0.500 3.14e-2 3.34e-2 ✓ sig. —
Nephropathic cystinosis Nephrotic syndrome
1 gene
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1 of 1 corroborated by 2+ sources
CTNS(5)
0.006 0.333 3.20e-2 3.39e-2 ✓ sig. —
Mountain sickness Pancreatic cancer
1 gene
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TACC1(1)
0.004 0.500 3.22e-2 3.42e-2 ✓ sig. —
Pancreatic cancer Trichotillomania
1 gene
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1 of 1 corroborated by 2+ sources
SLITRK1(5)
0.004 0.500 3.22e-2 3.42e-2 ✓ sig. —
Anorexia nervosa Hyperprolinemia
1 gene
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1 of 1 corroborated by 2+ sources
ALDH4A1(7)
0.004 0.500 3.23e-2 3.43e-2 ✓ sig. —
Kidney failure Sandhoff disease
1 gene
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1 of 1 corroborated by 2+ sources
HEXB(7)
0.004 0.500 3.23e-2 3.43e-2 ✓ sig. —
Anorexia nervosa Butyryl-coa dehydrogenase deficiency
1 gene
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1 of 1 corroborated by 2+ sources
ACADS(3)
0.004 0.500 3.23e-2 3.43e-2 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.