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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Cleft palate proliferative retinopathy developmental delay Eczema
1 gene
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1 of 1 corroborated by 2+ sources
LRRC32(4)
0.003 1.000 2.37e-2 2.55e-2 ✓ sig. —
Eczema severe intellectual disability-poor language-strabismus-grimacing face-long fingers syndrome
1 gene
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1 of 1 corroborated by 2+ sources
GATAD2B(2)
0.003 1.000 2.37e-2 2.55e-2 ✓ sig. —
Biotinidase deficiency Eczema
1 gene
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1 of 1 corroborated by 2+ sources
BTD(8)
0.003 1.000 2.37e-2 2.55e-2 ✓ sig. —
Birbeck granule deficiency Eczema
1 gene
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1 of 1 corroborated by 2+ sources
CD207(4)
0.003 1.000 2.37e-2 2.55e-2 ✓ sig. —
Congenital microtia Eczema
1 gene
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1 of 1 corroborated by 2+ sources
PRKRA(3)
0.003 1.000 2.37e-2 2.55e-2 ✓ sig. —
Eczema Prader-willi-like syndrome
1 gene
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1 of 1 corroborated by 2+ sources
CPE(2)
0.003 1.000 2.37e-2 2.55e-2 ✓ sig. —
Eczema RCBTB1-related retinopathy
1 gene
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1 of 1 corroborated by 2+ sources
RCBTB1(2)
0.003 1.000 2.37e-2 2.55e-2 ✓ sig. —
Eczema NIK deficiency
1 gene
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1 of 1 corroborated by 2+ sources
MAP3K14(2)
0.003 1.000 2.37e-2 2.55e-2 ✓ sig. —
Eczema Intellectual developmental disorder neuropsychiatric
1 gene
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1 of 1 corroborated by 2+ sources
SLC45A1(4)
0.003 1.000 2.37e-2 2.55e-2 ✓ sig. Cluster 252 →
Eczema Juvenile absence epilepsy
1 gene
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1 of 1 corroborated by 2+ sources
EFHC1(2)
0.003 1.000 2.37e-2 2.55e-2 ✓ sig. —
Eczema KCND2-related neurodevelopmental disorder with or without seizures
1 gene
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1 of 1 corroborated by 2+ sources
KCND2(2)
0.003 1.000 2.37e-2 2.55e-2 ✓ sig. —
Eczema Xy gonadal dysgenesis syndrome
1 gene
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1 of 1 corroborated by 2+ sources
PPP2R3C(2)
0.003 1.000 2.37e-2 2.55e-2 ✓ sig. —
Non-specific syndromic intellectual disability Usmani-riazuddin syndrome
1 gene
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1 of 1 corroborated by 2+ sources
AP1G1(5)
0.003 1.000 2.39e-2 2.57e-2 ✓ sig. Cluster 6 →
Congenital corneal opacity Non-specific syndromic intellectual disability
1 gene
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ZFHX4(1)
0.003 1.000 2.39e-2 2.57e-2 ✓ sig. —
Chopra-amiel-gordon syndrome Non-specific syndromic intellectual disability
1 gene
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1 of 1 corroborated by 2+ sources
ANKRD17(5)
0.003 1.000 2.39e-2 2.57e-2 ✓ sig. —
Chromosome 1q deletion syndrome Non-specific syndromic intellectual disability
1 gene
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1 of 1 corroborated by 2+ sources
ZBTB18(2)
0.003 1.000 2.39e-2 2.57e-2 ✓ sig. —
Chromosome 1q43-q44 deletion syndrome Non-specific syndromic intellectual disability
1 gene
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ZBTB18(1)
0.003 1.000 2.39e-2 2.57e-2 ✓ sig. —
Clark-baraitser syndrome Non-specific syndromic intellectual disability
1 gene
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1 of 1 corroborated by 2+ sources
TRIP12(4)
0.003 1.000 2.39e-2 2.57e-2 ✓ sig. Cluster 6 →
multiple congenital anomalies-neurodevelopmental syndrome, x-linked Non-specific syndromic intellectual disability
1 gene
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1 of 1 corroborated by 2+ sources
OTUD5(3)
0.003 1.000 2.39e-2 2.57e-2 ✓ sig. —
Bafopathy Non-specific syndromic intellectual disability
1 gene
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1 of 1 corroborated by 2+ sources
ACTL6A(4)
0.003 1.000 2.39e-2 2.57e-2 ✓ sig. —
Brunet-wagner neurodevelopmental syndrome Non-specific syndromic intellectual disability
1 gene
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1 of 1 corroborated by 2+ sources
RBL2(4)
0.003 1.000 2.39e-2 2.57e-2 ✓ sig. —
Cardiofacio-neurodevelopmental syndrome Non-specific syndromic intellectual disability
1 gene
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1 of 1 corroborated by 2+ sources
CCDC32(5)
0.003 1.000 2.39e-2 2.57e-2 ✓ sig. —
floating-harbor syndrome Non-specific syndromic intellectual disability
1 gene
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1 of 1 corroborated by 2+ sources
SRCAP(3)
0.003 1.000 2.39e-2 2.57e-2 ✓ sig. —
Non-specific syndromic intellectual disability Shukla-vernon syndrome
1 gene
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1 of 1 corroborated by 2+ sources
BCORL1(5)
0.003 1.000 2.39e-2 2.57e-2 ✓ sig. —
Non-specific syndromic intellectual disability spastic tetraplegia-thin corpus callosum-progressive postnatal microcephaly syndrome
1 gene
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1 of 1 corroborated by 2+ sources
SLC1A4(2)
0.003 1.000 2.39e-2 2.57e-2 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.