Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Anaphylatoxin inactivator deficiency Nonalcoholic fatty liver disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
CPN1(2)
0.003 1.000 2.05e-2 2.23e-2 ✓ sig. —
foveal hypoplasia - optic nerve decussation defect - anterior segment dysgenesis syndrome Nonalcoholic fatty liver disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
SLC38A8(2)
0.003 1.000 2.05e-2 2.23e-2 ✓ sig. —
autosomal recessive cerebellar ataxia Nonalcoholic fatty liver disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
CWF19L1(2)
0.003 1.000 2.05e-2 2.23e-2 ✓ sig. —
Nonalcoholic fatty liver disease platelet abnormalities with eosinophilia and immune-mediated inflammatory disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
ARPC1B(2)
0.003 1.000 2.05e-2 2.23e-2 ✓ sig. —
Leigh syndrome Lipoyltransferase deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
LIPT1(7)
0.009 0.333 2.07e-2 2.25e-2 ✓ sig. —
Alzheimer disease Developmental delay with language and ocular abnormalities
2 genes
Show details
2 of 2 corroborated by 2+ sources
0.001 1.000 2.07e-2 2.25e-2 ✓ sig. Cluster 2 →
Atelis syndrome Upper aerodigestive tract neoplasm
1 gene
Show details
1 of 1 corroborated by 2+ sources
SMC5(4)
0.006 0.500 2.08e-2 2.26e-2 ✓ sig. —
Kidney cancer Very long chain acyl-coa dehydrogenase deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
DLG4(2)
0.012 0.250 2.09e-2 2.27e-2 ✓ sig. —
Generalized epilepsy Glycine encephalopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
GLDC(7)
0.014 0.200 2.09e-2 2.27e-2 ✓ sig. —
snijders blok-campeau syndrome Stroke
1 gene
Show details
1 of 1 corroborated by 2+ sources
CHD3(2)
0.003 1.000 2.10e-2 2.28e-2 ✓ sig. —
hermansky-pudlak syndrome 4 Stroke
1 gene
Show details
1 of 1 corroborated by 2+ sources
HPS4(2)
0.003 1.000 2.10e-2 2.28e-2 ✓ sig. —
PRPF8-related retinopathy Stroke
1 gene
Show details
1 of 1 corroborated by 2+ sources
PRPF8(3)
0.003 1.000 2.10e-2 2.28e-2 ✓ sig. —
congenital disorder of glycosylation with defective fucosylation 1 Stroke
1 gene
Show details
1 of 1 corroborated by 2+ sources
FUT8(2)
0.003 1.000 2.10e-2 2.28e-2 ✓ sig. —
Male infertility round headed spermatozoa Rolandic epilepsy
1 gene
Show details
1 of 1 corroborated by 2+ sources
DPY19L2(2)
0.019 0.143 2.12e-2 2.30e-2 ✓ sig. —
Diabetic retinopathy Thyroid hemiagenesis
1 gene
Show details
1 of 1 corroborated by 2+ sources
VPS13C(2)
0.006 0.500 2.12e-2 2.30e-2 ✓ sig. —
Basal cell carcinoma xeroderma pigmentosum group A
1 gene
Show details
1 of 1 corroborated by 2+ sources
XPA(2)
0.003 1.000 2.12e-2 2.31e-2 ✓ sig. —
Basal cell carcinoma Intellectual disability, anterior maxillary protrusion, and strabismus
1 gene
Show details
1 of 1 corroborated by 2+ sources
SOBP(3)
0.003 1.000 2.12e-2 2.31e-2 ✓ sig. —
Basal cell carcinoma progressive essential tremor-speech impairment-facial dysmorphism-intellectual disability-abnormal behavior syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
SLC6A17(2)
0.003 1.000 2.12e-2 2.31e-2 ✓ sig. Cluster 29 →
Basal cell carcinoma RAB28-related retinopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
RAB28(2)
0.003 1.000 2.12e-2 2.31e-2 ✓ sig. —
Basal cell carcinoma histidinemia
1 gene
Show details
1 of 1 corroborated by 2+ sources
HAL(2)
0.003 1.000 2.12e-2 2.31e-2 ✓ sig. Cluster 29 →
Basal cell carcinoma Developmental delay with hypotonia and impaired language
1 gene
Show details
1 of 1 corroborated by 2+ sources
FBXW7(5)
0.003 1.000 2.12e-2 2.31e-2 ✓ sig. —
Basal cell carcinoma Enteropathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
SLCO2A1(3)
0.003 1.000 2.12e-2 2.31e-2 ✓ sig. —
Anterior maxillary protrusion-strabismus-intellectual disability syndrome Basal cell carcinoma
1 gene
Show details
1 of 1 corroborated by 2+ sources
SOBP(3)
0.003 1.000 2.12e-2 2.31e-2 ✓ sig. —
Cystinosis Nephrotic syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
CTNS(6)
0.006 0.500 2.14e-2 2.33e-2 ✓ sig. —
Amyotrophic lateral sclerosis Copper metabolism disorder
1 gene
Show details
CCS(1)
0.003 1.000 2.16e-2 2.34e-2 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.