Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Gastroesophageal reflux disease neonatal/infantile epilepsy syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
KCNH5(2)
0.004 1.000 1.81e-2 1.98e-2 ✓ sig. —
Depression neurodevelopmental disorder with language impairment and behavioral abnormalities
1 gene
Show details
1 of 1 corroborated by 2+ sources
GRIA2(2)
0.004 1.000 1.81e-2 1.98e-2 ✓ sig. —
Gastroesophageal reflux disease glycogen storage disease VI
1 gene
Show details
1 of 1 corroborated by 2+ sources
PYGL(2)
0.004 1.000 1.81e-2 1.98e-2 ✓ sig. —
Aromatic l-amino-acid decarboxylase deficiency Depression
1 gene
Show details
1 of 1 corroborated by 2+ sources
DDC(3)
0.004 1.000 1.81e-2 1.98e-2 ✓ sig. —
Depression immunodeficiency 106, susceptibility to viral infections
1 gene
Show details
1 of 1 corroborated by 2+ sources
IFNAR1(2)
0.004 1.000 1.81e-2 1.98e-2 ✓ sig. —
Gastroesophageal reflux disease immunodeficiency 53
1 gene
Show details
1 of 1 corroborated by 2+ sources
RELB(2)
0.004 1.000 1.81e-2 1.98e-2 ✓ sig. —
Gastroesophageal reflux disease microcephaly and chorioretinopathy 1
1 gene
Show details
1 of 1 corroborated by 2+ sources
TUBGCP6(2)
0.004 1.000 1.81e-2 1.98e-2 ✓ sig. —
Gastroesophageal reflux disease microcornea-myopic chorioretinal atrophy
1 gene
Show details
1 of 1 corroborated by 2+ sources
0.004 1.000 1.81e-2 1.98e-2 ✓ sig. —
Gastroesophageal reflux disease Muggenthaler-chowdhury-chioza syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
HYAL2(3)
0.004 1.000 1.81e-2 1.98e-2 ✓ sig. —
Childhood-onset basal ganglia degeneration syndrome Gastroesophageal reflux disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
VAC14(3)
0.004 1.000 1.81e-2 1.98e-2 ✓ sig. —
Chromosome 15q deletion syndrome Depression
1 gene
Show details
1 of 1 corroborated by 2+ sources
MCTP2(2)
0.004 1.000 1.81e-2 1.98e-2 ✓ sig. —
Chromosome 2p16.1-p15 deletion syndrome Gastroesophageal reflux disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
USP34(2)
0.004 1.000 1.81e-2 1.98e-2 ✓ sig. —
Cleft lip and palate, craniofacial dysmorphism, congenital heart defect, hearing loss syndrome Gastroesophageal reflux disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
HYAL2(3)
0.004 1.000 1.81e-2 1.98e-2 ✓ sig. —
Gastroesophageal reflux disease hemochromatosis type 3
1 gene
Show details
1 of 1 corroborated by 2+ sources
TFR2(2)
0.004 1.000 1.81e-2 1.98e-2 ✓ sig. —
Gastroesophageal reflux disease hermansky-pudlak syndrome 8
1 gene
Show details
1 of 1 corroborated by 2+ sources
BLOC1S3(2)
0.004 1.000 1.81e-2 1.98e-2 ✓ sig. —
Depression Hypertryptophanemia
1 gene
Show details
1 of 1 corroborated by 2+ sources
TDO2(6)
0.004 1.000 1.81e-2 1.98e-2 ✓ sig. —
2,8-dihydroxyadenine urolithiasis Depression
1 gene
Show details
APRT(1)
0.004 1.000 1.81e-2 1.98e-2 ✓ sig. —
Adenine phosphoribosyltransferase deficiency Depression
1 gene
Show details
1 of 1 corroborated by 2+ sources
APRT(2)
0.004 1.000 1.81e-2 1.98e-2 ✓ sig. —
Alopecia-neurological defects-endocrinopathy syndrome Depression
1 gene
Show details
1 of 1 corroborated by 2+ sources
RBM28(3)
0.004 1.000 1.81e-2 1.98e-2 ✓ sig. Cluster 2 →
Apolipoprotein c-ii deficiency Gastroesophageal reflux disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
APOC2(5)
0.004 1.000 1.81e-2 1.98e-2 ✓ sig. —
Depression systemic lupus erythematosus 17
1 gene
Show details
1 of 1 corroborated by 2+ sources
TLR7(2)
0.004 1.000 1.81e-2 1.98e-2 ✓ sig. —
Dorfman-chanarin disease Gastroesophageal reflux disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
ABHD5(3)
0.004 1.000 1.81e-2 1.98e-2 ✓ sig. —
Congenital heart defect, intellectual disability, facial dysmorphism syndrome Gastroesophageal reflux disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
CDK13(2)
0.004 1.000 1.81e-2 1.98e-2 ✓ sig. —
Intellectual developmental disorder speech peripheral neuropathy Nonsyndromic intellectual disability
1 gene
Show details
1 of 1 corroborated by 2+ sources
NEMF(5)
0.007 0.500 1.82e-2 1.99e-2 ✓ sig. —
Hyperlipidemia propionic acidemia
1 gene
Show details
1 of 1 corroborated by 2+ sources
PCCB(2)
0.007 0.500 1.82e-2 1.99e-2 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.