Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
neurodevelopmental disorder with microcephaly, ataxia, and seizures Nonsyndromic intellectual disability
1 gene
Show details
1 of 1 corroborated by 2+ sources
SARS1(4)
0.007 1.000 9.16e-3 1.05e-2 ✓ sig. —
nizon-isidor syndrome Nonsyndromic intellectual disability
1 gene
Show details
1 of 1 corroborated by 2+ sources
MED12L(3)
0.007 1.000 9.16e-3 1.05e-2 ✓ sig. —
MAN1B1-congenital disorder of glycosylation Nonsyndromic intellectual disability
1 gene
Show details
1 of 1 corroborated by 2+ sources
MAN1B1(4)
0.007 1.000 9.16e-3 1.05e-2 ✓ sig. —
muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a, 11 Nonsyndromic intellectual disability
1 gene
Show details
1 of 1 corroborated by 2+ sources
0.007 1.000 9.16e-3 1.05e-2 ✓ sig. —
Hyperlipidemia immunodeficiency 53
1 gene
Show details
1 of 1 corroborated by 2+ sources
RELB(2)
0.007 1.000 9.16e-3 1.05e-2 ✓ sig. —
Intellectual developmental disorder dysmorphic brain Nonsyndromic intellectual disability
1 gene
Show details
1 of 1 corroborated by 2+ sources
TRAPPC9(4)
0.007 1.000 9.16e-3 1.05e-2 ✓ sig. —
Intellectual developmental disorder growth other organ Nonsyndromic intellectual disability
1 gene
Show details
1 of 1 corroborated by 2+ sources
PPM1D(2)
0.007 1.000 9.16e-3 1.05e-2 ✓ sig. —
Intellectual developmental disorder growth seizures Nonsyndromic intellectual disability
1 gene
Show details
1 of 1 corroborated by 2+ sources
ABCA2(4)
0.007 1.000 9.16e-3 1.05e-2 ✓ sig. —
Intellectual developmental disorder neuropsychiatric Nonsyndromic intellectual disability
1 gene
Show details
1 of 1 corroborated by 2+ sources
SLC45A1(5)
0.007 1.000 9.16e-3 1.05e-2 ✓ sig. —
Intellectual developmental disorder seizures language Nonsyndromic intellectual disability
1 gene
Show details
1 of 1 corroborated by 2+ sources
SETD1B(4)
0.007 1.000 9.16e-3 1.05e-2 ✓ sig. —
Intellectual developmental disorder short stature behavioral Nonsyndromic intellectual disability
1 gene
Show details
1 of 1 corroborated by 2+ sources
IQSEC1(4)
0.007 1.000 9.16e-3 1.05e-2 ✓ sig. —
combined immunodeficiency due to DOCK8 deficiency Nonsyndromic intellectual disability
1 gene
Show details
1 of 1 corroborated by 2+ sources
DOCK8(4)
0.007 1.000 9.16e-3 1.05e-2 ✓ sig. —
Congenital cataract microcephaly intellectual disability syndrome Nonsyndromic intellectual disability
1 gene
Show details
1 of 1 corroborated by 2+ sources
MED25(4)
0.007 1.000 9.16e-3 1.05e-2 ✓ sig. —
congenital disorder of glycosylation, type iit Hyperlipidemia
1 gene
Show details
1 of 1 corroborated by 2+ sources
GALNT2(2)
0.007 1.000 9.16e-3 1.05e-2 ✓ sig. Cluster 254 →
developmental and epileptic encephalopathy, 77 Seizures
1 gene
Show details
1 of 1 corroborated by 2+ sources
PIGQ(2)
0.007 1.000 9.16e-3 1.05e-2 ✓ sig. —
Ectopic thyroid tissue Nonsyndromic intellectual disability
1 gene
Show details
1 of 1 corroborated by 2+ sources
FBXO31(3)
0.007 1.000 9.16e-3 1.05e-2 ✓ sig. —
Epilepsy due to perinatal stroke Nonsyndromic intellectual disability
1 gene
Show details
1 of 1 corroborated by 2+ sources
ST3GAL3(2)
0.007 1.000 9.16e-3 1.05e-2 ✓ sig. —
Cerebral amyloid angiopathy Early-onset progressive encephalopathy-hearing loss-pons hypoplasia-brain atrophy syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
0.014 0.500 9.20e-3 1.05e-2 ✓ sig. —
Motor neuron disease X-linked lymphoproliferative syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
XIAP(5)
0.014 0.500 9.20e-3 1.05e-2 ✓ sig. —
Focal facial dermal dysplasia Sjogren syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
TWIST2(6)
0.014 0.500 9.20e-3 1.05e-2 ✓ sig. —
Chylomicron retention disease Ciliopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
DCDC2(3)
0.014 0.500 9.20e-3 1.05e-2 ✓ sig. —
Cholecystolithiasis TRAF3 haploinsufficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
TRAF3(2)
0.007 1.000 9.22e-3 1.05e-2 ✓ sig. —
Urinary bladder neoplasms X-linked colobomatous microphthalmia, microcephaly, intellectual disability, short stature syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
HMGB3(4)
0.007 1.000 9.22e-3 1.05e-2 ✓ sig. —
hao-fountain syndrome Urinary bladder neoplasms
1 gene
Show details
1 of 1 corroborated by 2+ sources
USP7(2)
0.007 1.000 9.22e-3 1.05e-2 ✓ sig. —
Autoinflammatory syndrome with cytopenia, hyperzincemia, and hypercalprotectinemia Cholecystolithiasis
1 gene
Show details
1 of 1 corroborated by 2+ sources
PSTPIP1(2)
0.007 1.000 9.22e-3 1.05e-2 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.