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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
autosomal recessive spinocerebellar ataxia 10 Cerebellar ataxia
1 gene
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1 of 1 corroborated by 2+ sources
ANO10(2)
0.009 1.000 7.40e-3 8.70e-3 ✓ sig. —
autosomal recessive spinocerebellar ataxia 14 Cerebellar ataxia
1 gene
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1 of 1 corroborated by 2+ sources
SPTBN2(2)
0.009 1.000 7.40e-3 8.70e-3 ✓ sig. —
autosomal recessive spinocerebellar ataxia 20 Cerebellar ataxia
1 gene
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1 of 1 corroborated by 2+ sources
SNX14(3)
0.009 1.000 7.40e-3 8.70e-3 ✓ sig. —
fanconi anemia complementation group o Premature ovarian failure
1 gene
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1 of 1 corroborated by 2+ sources
RAD51C(2)
0.009 1.000 7.40e-3 8.70e-3 ✓ sig. —
Fanconi anemia complementation group U Premature ovarian failure
1 gene
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1 of 1 corroborated by 2+ sources
XRCC2(4)
0.009 1.000 7.40e-3 8.70e-3 ✓ sig. —
Fanconi anemia complementation group U Spermatogenic failure
1 gene
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1 of 1 corroborated by 2+ sources
XRCC2(5)
0.009 1.000 7.40e-3 8.70e-3 ✓ sig. —
Genetic infertility Premature ovarian failure
1 gene
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1 of 1 corroborated by 2+ sources
SPATA22(3)
0.009 1.000 7.40e-3 8.70e-3 ✓ sig. —
Cerebellar ataxia Troyer syndrome
1 gene
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1 of 1 corroborated by 2+ sources
SPART(4)
0.009 1.000 7.40e-3 8.70e-3 ✓ sig. —
Tetralogy of fallot Truncus arteriosus
1 gene
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1 of 1 corroborated by 2+ sources
TMEM260(2)
0.009 1.000 7.40e-3 8.70e-3 ✓ sig. Cluster 111 →
Premature ovarian failure Udp-glucose-hexose-1-phosphate uridylyltransferase
1 gene
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1 of 1 corroborated by 2+ sources
GALT(2)
0.009 1.000 7.40e-3 8.70e-3 ✓ sig. —
Premature ovarian failure Weiss-kruszka syndrome
1 gene
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1 of 1 corroborated by 2+ sources
ZNF462(6)
0.009 1.000 7.40e-3 8.70e-3 ✓ sig. —
Spermatogenic failure Xy gonadal dysgenesis syndrome
1 gene
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1 of 1 corroborated by 2+ sources
PPP2R3C(4)
0.009 1.000 7.40e-3 8.70e-3 ✓ sig. —
Congenital neurologic anomalies Guanidinoacetate methyltransferase deficiency
1 gene
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1 of 1 corroborated by 2+ sources
GAMT(3)
0.009 1.000 7.47e-3 8.76e-3 ✓ sig. —
Congenital neurologic anomalies hereditary spastic paraplegia 18
1 gene
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1 of 1 corroborated by 2+ sources
ERLIN2(2)
0.009 1.000 7.47e-3 8.76e-3 ✓ sig. —
hermansky-pudlak syndrome 7 Non-small cell lung carcinoma
1 gene
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1 of 1 corroborated by 2+ sources
DTNBP1(2)
0.009 1.000 7.47e-3 8.76e-3 ✓ sig. —
Lymphocytic leukemia Neurodevelopmental disorder with dilated cardiomyopathy
1 gene
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1 of 1 corroborated by 2+ sources
CAMK2D(2)
0.009 1.000 7.47e-3 8.76e-3 ✓ sig. —
Congenital neurologic anomalies neuropathy, hereditary sensory, type 1D
1 gene
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1 of 1 corroborated by 2+ sources
ATL1(2)
0.009 1.000 7.47e-3 8.76e-3 ✓ sig. —
osteopetrosis, autosomal dominant 3 Ovarian epithelial cancer
1 gene
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1 of 1 corroborated by 2+ sources
PLEKHM1(2)
0.009 1.000 7.47e-3 8.76e-3 ✓ sig. —
Childhood-onset autosomal recessive slowly progressive spinocerebellar ataxia Congenital neurologic anomalies
1 gene
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1 of 1 corroborated by 2+ sources
TPP1(2)
0.009 1.000 7.47e-3 8.76e-3 ✓ sig. —
Choreoacanthocytosis Congenital neurologic anomalies
1 gene
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1 of 1 corroborated by 2+ sources
VPS13A(3)
0.009 1.000 7.47e-3 8.76e-3 ✓ sig. —
Chromosome 1q deletion syndrome Ovarian epithelial cancer
1 gene
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1 of 1 corroborated by 2+ sources
ZBTB18(3)
0.009 1.000 7.47e-3 8.76e-3 ✓ sig. —
Chromosome 1q43-q44 deletion syndrome Ovarian epithelial cancer
1 gene
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1 of 1 corroborated by 2+ sources
ZBTB18(2)
0.009 1.000 7.47e-3 8.76e-3 ✓ sig. —
ciliary dyskinesia, primary, 44 Ovarian epithelial cancer
1 gene
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1 of 1 corroborated by 2+ sources
NEK10(2)
0.009 1.000 7.47e-3 8.76e-3 ✓ sig. —
ciliary dyskinesia, primary, 47, and lissencephaly Congenital neurologic anomalies
1 gene
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1 of 1 corroborated by 2+ sources
TP73(2)
0.009 1.000 7.47e-3 8.76e-3 ✓ sig. —
Bosley-salih-alorainy syndrome Congenital neurologic anomalies
1 gene
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1 of 1 corroborated by 2+ sources
HOXA1(2)
0.009 1.000 7.47e-3 8.76e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.