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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Aortic valve stenosis Clonal hematopoiesis
1 gene
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ANKRD7(1)
0.017 0.500 7.26e-3 8.57e-3 ✓ sig. —
Amish nemaline myopathy Myopathy
1 gene
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1 of 1 corroborated by 2+ sources
TNNT1(2)
0.009 1.000 7.27e-3 8.58e-3 ✓ sig. —
Eosinophilia Sialidosis
1 gene
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1 of 1 corroborated by 2+ sources
NEU1(6)
0.009 1.000 7.27e-3 8.58e-3 ✓ sig. —
Congenital finger flexion contractures Myopathy
1 gene
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TNNI2(1)
0.009 1.000 7.27e-3 8.58e-3 ✓ sig. —
Eosinophilia fontaine progeroid syndrome
1 gene
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1 of 1 corroborated by 2+ sources
0.009 1.000 7.27e-3 8.58e-3 ✓ sig. Cluster 16 →
glycogen storage disease V Myopathy
1 gene
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1 of 1 corroborated by 2+ sources
PYGM(2)
0.009 1.000 7.27e-3 8.58e-3 ✓ sig. —
Eosinophilia holocarboxylase synthetase deficiency
1 gene
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1 of 1 corroborated by 2+ sources
HLCS(2)
0.009 1.000 7.27e-3 8.58e-3 ✓ sig. —
Myopathy myopathy, proximal, and ophthalmoplegia
1 gene
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1 of 1 corroborated by 2+ sources
MYH2(2)
0.009 1.000 7.27e-3 8.58e-3 ✓ sig. —
Myopathy nemaline myopathy 5
1 gene
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1 of 1 corroborated by 2+ sources
TNNT1(2)
0.009 1.000 7.27e-3 8.58e-3 ✓ sig. —
Eosinophilia Neovascular inflammatory vitreoretinopathy
1 gene
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1 of 1 corroborated by 2+ sources
CAPN5(4)
0.009 1.000 7.27e-3 8.58e-3 ✓ sig. —
congenital myasthenic syndrome 12 Myopathy
1 gene
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1 of 1 corroborated by 2+ sources
GFPT1(2)
0.009 1.000 7.27e-3 8.58e-3 ✓ sig. —
Congenital sialidosis Eosinophilia
1 gene
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1 of 1 corroborated by 2+ sources
NEU1(3)
0.009 1.000 7.27e-3 8.58e-3 ✓ sig. —
Cranio-cervical dystonia Eosinophilia
1 gene
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1 of 1 corroborated by 2+ sources
ANO3(3)
0.009 1.000 7.27e-3 8.58e-3 ✓ sig. —
Autoinflammation with episodic fever and immune dysregulation Eosinophilia
1 gene
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1 of 1 corroborated by 2+ sources
SHARPIN(5)
0.009 1.000 7.27e-3 8.58e-3 ✓ sig. Cluster 16 →
autosomal dominant slowed nerve conduction velocity Myopathy
1 gene
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1 of 1 corroborated by 2+ sources
0.009 1.000 7.27e-3 8.58e-3 ✓ sig. —
Axonal neuropathy with neuromyotonia Myopathy
1 gene
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1 of 1 corroborated by 2+ sources
HINT1(3)
0.009 1.000 7.27e-3 8.58e-3 ✓ sig. Cluster 14 →
Childhood-onset autosomal recessive myopathy with external ophthalmoplegia Myopathy
1 gene
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1 of 1 corroborated by 2+ sources
MYH2(3)
0.009 1.000 7.27e-3 8.58e-3 ✓ sig. —
Myopathy TOR1AIP1-related myopathy
1 gene
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1 of 1 corroborated by 2+ sources
0.009 1.000 7.27e-3 8.58e-3 ✓ sig. —
Eosinophilia xeroderma pigmentosum variant type
1 gene
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1 of 1 corroborated by 2+ sources
POLH(2)
0.009 1.000 7.27e-3 8.58e-3 ✓ sig. —
Eosinophilia intellectual developmental disorder 59
1 gene
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1 of 1 corroborated by 2+ sources
CAMK2G(2)
0.009 1.000 7.27e-3 8.58e-3 ✓ sig. —
Eosinophilia jaberi-elahi syndrome
1 gene
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1 of 1 corroborated by 2+ sources
GTPBP2(2)
0.009 1.000 7.27e-3 8.58e-3 ✓ sig. Cluster 16 →
DPM3-congenital disorder of glycosylation Myopathy
1 gene
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1 of 1 corroborated by 2+ sources
DPM3(2)
0.009 1.000 7.27e-3 8.58e-3 ✓ sig. —
Early-onset myopathy-areflexia-respiratory distress-dysphagia syndrome Myopathy
1 gene
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1 of 1 corroborated by 2+ sources
MEGF10(2)
0.009 1.000 7.27e-3 8.58e-3 ✓ sig. —
MEGF10-related myopathy Myopathy
1 gene
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1 of 1 corroborated by 2+ sources
MEGF10(2)
0.009 1.000 7.27e-3 8.58e-3 ✓ sig. —
Multisystem disorder Myopathy
1 gene
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1 of 1 corroborated by 2+ sources
0.009 1.000 7.27e-3 8.58e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.