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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
congenital myopathy with myasthenic-like onset Gestational diabetes
1 gene
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1 of 1 corroborated by 2+ sources
PAX7(2)
0.011 1.000 5.84e-3 7.05e-3 ✓ sig. —
Deafness and myopia Gestational diabetes
1 gene
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1 of 1 corroborated by 2+ sources
SLITRK6(4)
0.011 1.000 5.84e-3 7.05e-3 ✓ sig. —
Gestational diabetes TSPAN12-related exudative vitreoretinopathy
1 gene
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1 of 1 corroborated by 2+ sources
TSPAN12(2)
0.011 1.000 5.84e-3 7.05e-3 ✓ sig. —
Ciliary dyskinesia Young syndrome
1 gene
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1 of 1 corroborated by 2+ sources
CFAP221(5)
0.011 1.000 5.84e-3 7.05e-3 ✓ sig. —
Brachial plexus neuritis Gestational diabetes
1 gene
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1 of 1 corroborated by 2+ sources
SEPTIN9(3)
0.011 1.000 5.84e-3 7.05e-3 ✓ sig. —
Gestational diabetes renal hypomagnesemia 3
1 gene
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1 of 1 corroborated by 2+ sources
CLDN16(2)
0.011 1.000 5.84e-3 7.05e-3 ✓ sig. —
Ciliary dyskinesia spermatogenic failure 18
1 gene
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1 of 1 corroborated by 2+ sources
DNAH1(6)
0.011 1.000 5.84e-3 7.05e-3 ✓ sig. —
Ciliary dyskinesia spermatogenic failure 46
1 gene
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1 of 1 corroborated by 2+ sources
DNAH8(2)
0.011 1.000 5.84e-3 7.05e-3 ✓ sig. —
Ciliary dyskinesia spermatogenic failure 56
1 gene
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1 of 1 corroborated by 2+ sources
DNAH10(3)
0.011 1.000 5.84e-3 7.05e-3 ✓ sig. —
gaze palsy, familial horizontal, with progressive scoliosis 1 Gestational diabetes
1 gene
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1 of 1 corroborated by 2+ sources
ROBO3(2)
0.011 1.000 5.84e-3 7.05e-3 ✓ sig. —
genitourinary and/or brain malformation syndrome Gestational diabetes
1 gene
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1 of 1 corroborated by 2+ sources
0.011 1.000 5.84e-3 7.05e-3 ✓ sig. Cluster 73 →
Ciliary dyskinesia glutaryl-CoA dehydrogenase deficiency
1 gene
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1 of 1 corroborated by 2+ sources
GCDH(2)
0.011 1.000 5.84e-3 7.05e-3 ✓ sig. —
Ciliary dyskinesia ciliary dyskinesia, primary, 36, x-linked
1 gene
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1 of 1 corroborated by 2+ sources
DNAAF6(7)
0.011 1.000 5.84e-3 7.05e-3 ✓ sig. Cluster 9 →
Ciliary dyskinesia ciliary dyskinesia, primary, 38
1 gene
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1 of 1 corroborated by 2+ sources
CFAP300(7)
0.011 1.000 5.84e-3 7.05e-3 ✓ sig. —
Ciliary dyskinesia ciliary dyskinesia, primary, 40
1 gene
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1 of 1 corroborated by 2+ sources
DNAH9(6)
0.011 1.000 5.84e-3 7.05e-3 ✓ sig. —
Ciliary dyskinesia ciliary dyskinesia, primary, 41
1 gene
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1 of 1 corroborated by 2+ sources
GAS2L2(6)
0.011 1.000 5.84e-3 7.05e-3 ✓ sig. —
Ciliary dyskinesia ciliary dyskinesia, primary, 42
1 gene
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1 of 1 corroborated by 2+ sources
MCIDAS(6)
0.011 1.000 5.84e-3 7.05e-3 ✓ sig. Cluster 9 →
Ciliary dyskinesia ciliary dyskinesia, primary, 43
1 gene
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1 of 1 corroborated by 2+ sources
FOXJ1(7)
0.011 1.000 5.84e-3 7.05e-3 ✓ sig. Cluster 9 →
Ciliary dyskinesia ciliary dyskinesia, primary, 44
1 gene
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1 of 1 corroborated by 2+ sources
NEK10(6)
0.011 1.000 5.84e-3 7.05e-3 ✓ sig. —
Ciliary dyskinesia ciliary dyskinesia, primary, 45
1 gene
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1 of 1 corroborated by 2+ sources
TTC12(6)
0.011 1.000 5.84e-3 7.05e-3 ✓ sig. —
Ciliary dyskinesia ciliary dyskinesia, primary, 46
1 gene
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1 of 1 corroborated by 2+ sources
STK36(6)
0.011 1.000 5.84e-3 7.05e-3 ✓ sig. —
Ciliary dyskinesia ciliary dyskinesia, primary, 47, and lissencephaly
1 gene
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1 of 1 corroborated by 2+ sources
TP73(4)
0.011 1.000 5.84e-3 7.05e-3 ✓ sig. —
Ciliary dyskinesia ciliary dyskinesia, primary, 48, without situs inversus
1 gene
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1 of 1 corroborated by 2+ sources
NME5(6)
0.011 1.000 5.84e-3 7.05e-3 ✓ sig. Cluster 9 →
Ciliary dyskinesia ciliary dyskinesia, primary, 49, without situs inversus
1 gene
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1 of 1 corroborated by 2+ sources
CFAP74(5)
0.011 1.000 5.84e-3 7.05e-3 ✓ sig. Cluster 9 →
Ciliary dyskinesia ciliary dyskinesia, primary, 53
1 gene
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1 of 1 corroborated by 2+ sources
CLXN(6)
0.011 1.000 5.84e-3 7.05e-3 ✓ sig. Cluster 9 →

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.