Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Carotid intima-media thickness Lipidoses
1 gene
Show details
1 of 1 corroborated by 2+ sources
PPARG(2)
0.050 1.000 1.23e-3 1.99e-3 ✓ sig. —
Lipoidosis Palmoplantar keratoderma and congenital alopecia
1 gene
Show details
1 of 1 corroborated by 2+ sources
LSS(3)
0.050 1.000 1.23e-3 1.99e-3 ✓ sig. —
Cataract-alopecia-sclerodactyly syndrome Lipoidosis
1 gene
Show details
LSS(1)
0.050 1.000 1.23e-3 1.99e-3 ✓ sig. —
Carotid intima-media thickness Lipoidosis
1 gene
Show details
PPARG(1)
0.050 1.000 1.23e-3 1.99e-3 ✓ sig. —
Lipidoses mednik syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
AP1S1(2)
0.050 1.000 1.23e-3 1.99e-3 ✓ sig. —
Lipoidosis mednik syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
AP1S1(2)
0.050 1.000 1.23e-3 1.99e-3 ✓ sig. —
Burkitt lymphoma Merkel cell carcinoma
1 gene
Show details
1 of 1 corroborated by 2+ sources
MYC(4)
0.050 1.000 1.23e-3 1.99e-3 ✓ sig. —
Carcinoma in situ Mouth disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
PTGS2(2)
0.050 1.000 1.23e-3 1.99e-3 ✓ sig. —
Mouth disease Urinary bladder neck obstruction
1 gene
Show details
1 of 1 corroborated by 2+ sources
PTGS2(2)
0.050 1.000 1.23e-3 1.99e-3 ✓ sig. —
Mouth disease Tongue disorder
1 gene
Show details
ESRRG(1)
0.050 1.000 1.23e-3 1.99e-3 ✓ sig. —
Hyperparathyroidism multiple endocrine neoplasia type 1
1 gene
Show details
1 of 1 corroborated by 2+ sources
MEN1(6)
0.050 1.000 1.23e-3 1.99e-3 ✓ sig. —
Hyperparathyroidism multiple endocrine neoplasia type 4
1 gene
Show details
1 of 1 corroborated by 2+ sources
CDKN1B(2)
0.050 1.000 1.23e-3 1.99e-3 ✓ sig. —
familial meningioma Periodontal disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
SMARCE1(2)
0.050 1.000 1.23e-3 1.99e-3 ✓ sig. —
fanconi anemia complementation group g Mouth disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
FANCG(3)
0.050 1.000 1.23e-3 1.99e-3 ✓ sig. —
Farber disease Lipidoses
1 gene
Show details
1 of 1 corroborated by 2+ sources
ASAH1(2)
0.050 1.000 1.23e-3 1.99e-3 ✓ sig. —
Farber disease Lipoidosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
ASAH1(2)
0.050 1.000 1.23e-3 1.99e-3 ✓ sig. —
FLVCR1-related retinopathy with or without ataxia Hereditary sensory and autonomic neuropathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
FLVCR1(2)
0.050 1.000 1.23e-3 1.99e-3 ✓ sig. —
focal segmental glomerulosclerosis 4, susceptibility to Hyperparathyroidism
1 gene
Show details
1 of 1 corroborated by 2+ sources
APOL1(2)
0.050 1.000 1.23e-3 1.99e-3 ✓ sig. —
ASAH1-related sphingolipidosis Lipidoses
1 gene
Show details
1 of 1 corroborated by 2+ sources
ASAH1(2)
0.050 1.000 1.23e-3 1.99e-3 ✓ sig. —
ASAH1-related sphingolipidosis Lipoidosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
ASAH1(2)
0.050 1.000 1.23e-3 1.99e-3 ✓ sig. —
autosomal agammaglobulinemia B-lymphoblastic leukemia/lymphoma
1 gene
Show details
1 of 1 corroborated by 2+ sources
TCF3(2)
0.050 1.000 1.23e-3 1.99e-3 ✓ sig. —
autosomal agammaglobulinemia Burkitt lymphoma
1 gene
Show details
1 of 1 corroborated by 2+ sources
TCF3(2)
0.050 1.000 1.23e-3 1.99e-3 ✓ sig. Cluster 181 →
autosomal dominant macrothrombocytopenia Blepharoptosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
TUBA4A(2)
0.050 1.000 1.23e-3 1.99e-3 ✓ sig. —
B-lymphoblastic leukemia/lymphoma Barakat syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
GATA3(3)
0.050 1.000 1.23e-3 1.99e-3 ✓ sig. —
Hemoglobin high altitude adaptation Polycythemia
1 gene
Show details
1 of 1 corroborated by 2+ sources
EGLN1(4)
0.050 1.000 1.23e-3 1.99e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.