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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Male infertility motility disorder Male infertility spermatogenesis disorder
1 gene
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CCDC146(1)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Breast neoplasms meier-gorlin syndrome 4
1 gene
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1 of 1 corroborated by 2+ sources
CDT1(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Lymphedema microcephaly with or without chorioretinopathy, lymphedema, or intellectual disability
1 gene
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1 of 1 corroborated by 2+ sources
KIF11(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Congenital total cataract Microstomia
1 gene
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LEMD2(1)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Congenital anomaly of limb Middle lobe syndrome
1 gene
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1 of 1 corroborated by 2+ sources
SALL1(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Middle lobe syndrome Vacterl association
1 gene
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SALL1(1)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Minor epilepsy Seasonal affective disorder
1 gene
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NPY(1)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Mitochondrial encephalocardiomyopathy Mitochondrial encephalomyopathy
1 gene
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1 of 1 corroborated by 2+ sources
TMEM70(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. Cluster 50 →
Childhood myocerebrohepatopathy spectrum Mitochondrial encephalomyopathy
1 gene
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POLG(1)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Loeys-dietz syndrome multiple self-healing squamous epithelioma
1 gene
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1 of 1 corroborated by 2+ sources
TGFBR1(6)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
muscular dystrophy-dystroglycanopathy Walker-warburg syndrome
1 gene
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1 of 1 corroborated by 2+ sources
LARGE1(4)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. Cluster 14 →
muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a, 11 Walker-warburg syndrome
1 gene
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1 of 1 corroborated by 2+ sources
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A13 Walker-warburg syndrome
1 gene
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1 of 1 corroborated by 2+ sources
B4GAT1(4)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. Cluster 14 →
Hydrops fetalis myasthenic syndrome, congenital, 1b, fast-channel
1 gene
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1 of 1 corroborated by 2+ sources
CHRNA1(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Body weight TFAP2B-related congenital heart disease spectrum disorder
1 gene
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1 of 1 corroborated by 2+ sources
TFAP2B(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Patent ductus arteriosus TFAP2B-related congenital heart disease spectrum disorder
1 gene
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1 of 1 corroborated by 2+ sources
TFAP2B(5)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Hemophilia a thrombophilia, X-linked, due to factor 9 defect
1 gene
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1 of 1 corroborated by 2+ sources
F9(3)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Congenital anomaly of limb Timothy syndrome
1 gene
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1 of 1 corroborated by 2+ sources
CACNA1C(6)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Dentinogenesis imperfecta Tricho-dento-osseous syndrome
1 gene
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1 of 1 corroborated by 2+ sources
DLX3(6)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Distal arthrogryposis Trismus-pseudocamptodactyly syndrome
1 gene
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1 of 1 corroborated by 2+ sources
MYH8(4)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Catalepsy Tyrosine hydroxylase deficiency
1 gene
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1 of 1 corroborated by 2+ sources
TH(4)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Pheochromocytoma Tyrosine hydroxylase deficiency
1 gene
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1 of 1 corroborated by 2+ sources
TH(3)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Congenital anomaly of limb Ulnar-mammary syndrome
1 gene
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1 of 1 corroborated by 2+ sources
TBX3(6)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Vacterl association Vacterl-hydrocephalus syndrome
1 gene
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1 of 1 corroborated by 2+ sources
FANCB(6)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Vacterl association Waardenburg anophthalmia syndrome
1 gene
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SMOC1(1)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. Cluster 249 →

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.