Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Autoimmune neurological syndrome multiple symmetric lipomatosis with partial lipodystrophy
1 gene
Show details
1 of 1 corroborated by 2+ sources
MFN2(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. Cluster 207 →
Autoimmune neurological syndrome Charcot-Marie-Tooth disease type 2A2
1 gene
Show details
1 of 1 corroborated by 2+ sources
MFN2(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. Cluster 207 →
Autoimmune neurological syndrome Delta-sarcoglycan-related limb-girdle muscular dystrophy r6
1 gene
Show details
1 of 1 corroborated by 2+ sources
SGCD(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Autoimmune neurological syndrome dilated cardiomyopathy 1L
1 gene
Show details
1 of 1 corroborated by 2+ sources
SGCD(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Behavior disorders Seasonal affective disorder
1 gene
Show details
SLC6A4(1)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Benign mesial temporal lobe epilepsy Generalized epilepsy with febrile seizures plus
1 gene
Show details
1 of 1 corroborated by 2+ sources
CPA6(3)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
congenital muscular dystrophy with intellectual disability and severe epilepsy Primary angle closure glaucoma
1 gene
Show details
1 of 1 corroborated by 2+ sources
DPM2(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. Cluster 21 →
Congenital muscular hypertrophy-cerebral syndrome Rett syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
SMC1A(4)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
congenital myasthenic syndrome 10 Rett syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
DOK7(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
congenital myopathy with myasthenic-like onset Lymphedema
1 gene
Show details
1 of 1 corroborated by 2+ sources
PAX7(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Congenital retinal aneurysm Rett syndrome
1 gene
Show details
RS1(1)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Congenital retinal anomaly Rett syndrome
1 gene
Show details
RS1(1)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Congenital sclerocornea Congenital total cataract
1 gene
Show details
GJA8(1)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Contractures, pterygia, and spondylocarpotarsal fusion syndrome Distal arthrogryposis
1 gene
Show details
1 of 1 corroborated by 2+ sources
MYH3(5)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Contractures, pterygia, and variable skeletal fusions syndrome Distal arthrogryposis
1 gene
Show details
1 of 1 corroborated by 2+ sources
MYH3(5)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Coronary stenosis Urinary retention
1 gene
Show details
1 of 1 corroborated by 2+ sources
EDN1(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Coronary stenosis Myosin storage myopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
MYH7(3)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. Cluster 89 →
Biventricular noncompaction cardiomyopathy Coronary stenosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
MYH7(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. Cluster 89 →
Coronary stenosis MYH7-related skeletal myopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
MYH7(3)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. Cluster 89 →
Coronary stenosis dilated cardiomyopathy 1S
1 gene
Show details
1 of 1 corroborated by 2+ sources
MYH7(3)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. Cluster 89 →
craniosynostosis 2 Dental enamel hypoplasia
1 gene
Show details
1 of 1 corroborated by 2+ sources
MSX2(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Deafness with cataract, intellectual disability, and polyneuropathy Patent ductus arteriosus
1 gene
Show details
1 of 1 corroborated by 2+ sources
PSMC3(4)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Delayed sleep phase syndrome Seasonal affective disorder
1 gene
Show details
1 of 1 corroborated by 2+ sources
CRY1(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Dental enamel hypoplasia Testicular regression syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
DHX37(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Central hypothyroidism Dental enamel hypoplasia
1 gene
Show details
1 of 1 corroborated by 2+ sources
ROBO1(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.