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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Tricuspid valve disease Waardenburg syndrome type 4B
1 gene
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1 of 1 corroborated by 2+ sources
EDN3(2)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
Septo-optic dysplasia Webb-dattani syndrome
1 gene
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1 of 1 corroborated by 2+ sources
ARNT2(6)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. Cluster 218 →
Perisylvian syndrome Wolfram-like syndrome
1 gene
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1 of 1 corroborated by 2+ sources
WFS1(7)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
Swyer syndrome X-linked adrenal hypoplasia congenita
1 gene
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1 of 1 corroborated by 2+ sources
NR0B1(3)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
Septo-optic dysplasia X-linked congenital generalized hypertrichosis
1 gene
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1 of 1 corroborated by 2+ sources
SOX3(3)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
Vascular system injury X-linked distal spinal muscular atrophy
1 gene
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1 of 1 corroborated by 2+ sources
ATP7A(5)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
Porphyria X-linked erythropoietic protoporphyria
1 gene
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1 of 1 corroborated by 2+ sources
ALAS2(5)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
Deafness, x-linked X-linked external auditory canal atresia, dilated internal auditory canal, facial dysmorphism syndrome
1 gene
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1 of 1 corroborated by 2+ sources
GPRASP2(4)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. Cluster 210 →
Deafness, x-linked X-linked hereditary sensory and autonomic neuropathy with deafness
1 gene
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1 of 1 corroborated by 2+ sources
AIFM1(7)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
Omenn syndrome X-linked severe combined immunodeficiency
1 gene
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1 of 1 corroborated by 2+ sources
IL2RG(4)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
Congenital skin anomaly xeroderma pigmentosum group D
1 gene
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1 of 1 corroborated by 2+ sources
ERCC2(2)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
Skin abnormalities xeroderma pigmentosum group D
1 gene
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1 of 1 corroborated by 2+ sources
ERCC2(2)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
CBL-related disorder Myelomonocytic leukemia
1 gene
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1 of 1 corroborated by 2+ sources
CBL(5)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
Angelman syndrome CDKL5 disorder
1 gene
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1 of 1 corroborated by 2+ sources
CDKL5(4)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. Cluster 61 →
Central retinal vein occlusion Deep vein thrombosis
1 gene
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PROC(1)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
Beckwith-wiedemann syndrome Cerebellar ataxia with deafness and narcolepsy
1 gene
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1 of 1 corroborated by 2+ sources
DNMT1(5)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
Beckwith-wiedemann syndrome Cerebellar ataxia, deafness, and narcolepsy
1 gene
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1 of 1 corroborated by 2+ sources
DNMT1(3)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
cerebral arteriopathy, autosomal recessive, with subcortical infarcts and leukoencephalopathy 1 Common migraine
1 gene
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1 of 1 corroborated by 2+ sources
NOTCH3(2)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
Cerebrofaciothoracic dysplasia Tooth abnormalities
1 gene
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1 of 1 corroborated by 2+ sources
TMCO1(3)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
Cerebrovascular trauma Common migraine
1 gene
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1 of 1 corroborated by 2+ sources
PHACTR1(2)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
Charcot-Marie-Tooth disease axonal type 2F Tongue neoplasms
1 gene
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1 of 1 corroborated by 2+ sources
HSPB1(2)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
Childhood absence epilepsy Conn syndrome
1 gene
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1 of 1 corroborated by 2+ sources
CACNA1H(4)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. Cluster 47 →
Chops syndrome Cornelia de lange syndrome
1 gene
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1 of 1 corroborated by 2+ sources
AFF4(3)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
Chromosome 15q24 deletion syndrome Dwarfism
1 gene
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1 of 1 corroborated by 2+ sources
SIN3A(3)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
Chromosome 19q13.11 deletion syndrome Ectrodactyly
1 gene
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UBA2(1)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.