Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Hereditary hemorrhagic telangiectasia juvenile polyposis/hereditary hemorrhagic telangiectasia syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
SMAD4(4)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. —
Keratosis linearis-ichthyosis congenita-sclerosing keratoderma syndrome Proteasome associated autoinflammatory syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
POMP(6)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. —
keutel syndrome Varicose veins
1 gene
Show details
1 of 1 corroborated by 2+ sources
MGP(3)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. —
Kleine-levin syndrome NAA10-related syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
NAA10(2)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. —
Congenital omphalocele LAMA5-related multisystemic syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
LAMA5(2)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. —
Leiomyosarcoma PTEN hamartoma tumor syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
PTEN(2)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. —
Congenital muscular dystrophy due to dystroglycanopathy myopathy caused by variation in GMPPB
1 gene
Show details
1 of 1 corroborated by 2+ sources
GMPPB(2)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. Cluster 14 →
Congenital muscular dystrophy due to dystroglycanopathy muscular dystrophy-dystroglycanopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
LARGE1(2)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. Cluster 14 →
Congenital cardiovascular anomaly congenital myasthenic syndrome 10
1 gene
Show details
1 of 1 corroborated by 2+ sources
DOK7(2)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. —
Congenital idiopathic intestinal pseudoobstruction Congenital omphalocele
1 gene
Show details
1 of 1 corroborated by 2+ sources
FLNA(2)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. —
Congenital omphalocele Otopalatodigital spectrum disorder
1 gene
Show details
1 of 1 corroborated by 2+ sources
FLNA(2)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. —
Congenital omphalocele Terminal osseous dysplasia with pigmentary defects
1 gene
Show details
1 of 1 corroborated by 2+ sources
FLNA(6)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. —
Congenital omphalocele X-linked ehlers-danlos syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
FLNA(3)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. —
Congenital septal defect of heart methylcobalamin deficiency type cblE
1 gene
Show details
1 of 1 corroborated by 2+ sources
MTRR(2)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. —
Congenital septal defect of heart Interrupted aortic arch
1 gene
Show details
NKX2-5(1)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. Cluster 161 →
Congenital septal defect of heart NKX2.5-related congenital, conduction and myopathic heart disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
NKX2-5(2)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. Cluster 161 →
Congenital septal defect of heart Right bundle branch block
1 gene
Show details
BMPR2(1)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. —
Congenital sialidosis Mucolipidosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
NEU1(2)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. —
Congenital venous anomaly Rupture, spontaneous
1 gene
Show details
1 of 1 corroborated by 2+ sources
COL5A1(2)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. —
Continuous spike and wave during sleep syndrome Familial temporal lobe epilepsy
1 gene
Show details
1 of 1 corroborated by 2+ sources
GRIN2A(2)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. —
Coproporphyria Porphyria cutanea tarda
1 gene
Show details
1 of 1 corroborated by 2+ sources
CPOX(2)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. —
craniofacial dysplasia - osteopenia syndrome Frontonasal dysplasia
1 gene
Show details
1 of 1 corroborated by 2+ sources
IRX5(5)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. —
Creatine phosphokinase elevation Tubular aggregate myopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
CAV3(3)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. Cluster 217 →
Cryptophthalmia Cryptophthalmos syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
FREM2(3)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. —
Cryptophthalmos syndrome Cryptotria
1 gene
Show details
1 of 1 corroborated by 2+ sources
FREM2(2)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.