Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Hemoglobin barts fetalis syndrome Intellectual developmental disorder hypotonic x-linked
1 gene
Show details
1 of 1 corroborated by 2+ sources
ATRX(4)
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. —
Digenic alport syndrome Intellectual disability, autism, speech apraxia, craniofacial dysmorphism syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
COL4A3(2)
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. Cluster 49 →
Intestinal perforation Renovascular hypertension
1 gene
Show details
1 of 1 corroborated by 2+ sources
NOS3(2)
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. —
Arteriovenous malformations Intracranial arteriovenous malformation
1 gene
Show details
1 of 1 corroborated by 2+ sources
KRAS(3)
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. —
Encephalocraniocutaneous lipomatosis Intracranial arteriovenous malformation
1 gene
Show details
1 of 1 corroborated by 2+ sources
KRAS(3)
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. —
Ataxia with vitamin e deficiency Isolated systolic hypertension
1 gene
Show details
1 of 1 corroborated by 2+ sources
APOB(2)
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. Cluster 140 →
Intracranial arteriovenous malformation juvenile polyposis syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
ENG(2)
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. —
Panuveitis Thrombotic microangiopathy
1 gene
Show details
CFH(1)
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. Cluster 107 →
Atypical hemolytic uremic syndrome Panuveitis
1 gene
Show details
1 of 1 corroborated by 2+ sources
CFH(2)
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. Cluster 107 →
11p11.2 deletion syndrome Parietal foramina
1 gene
Show details
1 of 1 corroborated by 2+ sources
ALX4(6)
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. Cluster 93 →
Parietal foramina Potocki-shaffer syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
ALX4(7)
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. Cluster 93 →
Arteriovenous malformations Parkes weber syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
RASA1(5)
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. Cluster 40 →
Partial agenesis of corpus callosum Triphalangeal thumb-polysyndactyly syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
SHH(2)
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. Cluster 232 →
Common arterial trunk with aortic dominance Partial pancreatic agenesis
1 gene
Show details
1 of 1 corroborated by 2+ sources
GATA6(2)
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. —
Pilosebaceous disorder White sutton syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
GLI3(2)
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. Cluster 142 →
Pituitary gigantism Vipoma
1 gene
Show details
1 of 1 corroborated by 2+ sources
MEN1(3)
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. —
Hyper-immunoglobulin e syndrome platelet-type bleeding disorder 16
1 gene
Show details
1 of 1 corroborated by 2+ sources
ITGB3(2)
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. —
Cervical dysplasia Portal vein thrombosis
1 gene
Show details
MTHFR(1)
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. Cluster 204 →
Mitral valve disease Portal vein thrombosis
1 gene
Show details
MTHFR(1)
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. —
Potocki-lupski syndrome Smith-magenis syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
RAI1(8)
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. Cluster 347 →
Catel-manzke syndrome Congenital vertebral-cardiac-renal anomalies syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
KYNU(3)
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. Cluster 386 →
Caudal regression syndrome Congenital exomphalos
1 gene
Show details
PCSK5(1)
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. Cluster 94 →
Caudal regression syndrome Currarino syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
PCSK5(2)
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. Cluster 94 →
Cebalid syndrome overgrowth syndrome and/or cerebral malformations due to abnormalities in MTOR pathway genes
1 gene
Show details
1 of 1 corroborated by 2+ sources
MTOR(2)
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. —
Cerebellar ataxia, impaired intellectual development, and dysequilibrium Cerebellar ataxia, mental retardation, and dysequilibrium
1 gene
Show details
1 of 1 corroborated by 2+ sources
WDR81(3)
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. Cluster 317 →

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.