Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
TUBB3-related tubulinopathy X-linked hydrocephalus syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
TUBB3(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
Coronal craniosynostosis TWIST1-related craniosynostosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
TWIST1(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 127 →
Saethre-chotzen syndrome TWIST1-related craniosynostosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
TWIST1(6)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
Clapo syndrome Vascular malformation
1 gene
Show details
1 of 1 corroborated by 2+ sources
PIK3CA(4)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 44 →
Cloves syndrome Vascular malformation
1 gene
Show details
1 of 1 corroborated by 2+ sources
PIK3CA(3)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 44 →
Congenital intestinal duplication Vascular malformation
1 gene
Show details
1 of 1 corroborated by 2+ sources
PIK3CA(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 44 →
Congenital macrodactylia Vascular malformation
1 gene
Show details
1 of 1 corroborated by 2+ sources
PIK3CA(3)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 44 →
Congenital malformation syndromes involving early overgrowth Vascular malformation
1 gene
Show details
1 of 1 corroborated by 2+ sources
PIK3CA(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 44 →
Vitamin d deficiency Worth syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
LRP5(3)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 98 →
polycystic liver disease 4 with or without kidney cysts Vitamin d deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
LRP5(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 98 →
LRP5-related exudative vitreoretinopathy Vitamin d deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
LRP5(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 98 →
Collagenopathy Vitreoretinopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
COL2A1(4)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 11 →
Coxa plana Vitreoretinopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
COL2A1(4)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 11 →
Czech dysplasia Vitreoretinopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
COL2A1(5)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 11 →
Dysspondyloenchondromatosis Vitreoretinopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
COL2A1(5)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 11 →
kniest dysplasia Vitreoretinopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
COL2A1(5)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 11 →
Intellectual developmental disorder dysmorphic ocular microcephaly peripheral Weyers acrofacial dysostosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
CTNNB1(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
CTNNB1-related neurodevelopmental disorder and/or vitreoretinopathy Weyers acrofacial dysostosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
CTNNB1(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
Schimmelpenning-feuerstein-mims syndrome Woolly hair nevus
1 gene
Show details
1 of 1 corroborated by 2+ sources
HRAS(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 18 →
Seminoma Woolly hair nevus
1 gene
Show details
1 of 1 corroborated by 2+ sources
HRAS(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 18 →
Hemoglobin barts fetalis syndrome X-linked alpha-thalassemia-intellectual disability syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
ATRX(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
Hemoglobin h disease X-linked alpha-thalassemia-intellectual disability syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
ATRX(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
X-linked combined immunodeficiency diseases X-linked severe combined immunodeficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
IL2RG(3)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
Cerebral creatine deficiency syndrome X-linked creatine transporter deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
SLC6A8(3)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 358 →
Partial corpus callosum agenesis, x-linked X-linked hydrocephalus syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
L1CAM(4)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 274 →

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.