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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Camptodactyly, tall stature, and hearing loss syndrome Coronal craniosynostosis
1 gene
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1 of 1 corroborated by 2+ sources
FGFR3(5)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
Catshl syndrome Coronal craniosynostosis
1 gene
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1 of 1 corroborated by 2+ sources
FGFR3(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
Cortical dysgenesis with pontocerebellar hypoplasia X-linked hydrocephalus syndrome
1 gene
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1 of 1 corroborated by 2+ sources
TUBB3(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
Corticobasal syndrome frontotemporal dementia and/or amyotrophic lateral sclerosis 4
1 gene
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1 of 1 corroborated by 2+ sources
TBK1(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
Cramp-fasciculation syndrome Episodic pain syndrome
1 gene
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1 of 1 corroborated by 2+ sources
TRPA1(4)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
Achondroplasia Craniofacial dysostosis
1 gene
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1 of 1 corroborated by 2+ sources
FGFR3(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
Craniometaphyseal dysplasia Palmoplantar keratoderma with congenital alopecia
1 gene
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1 of 1 corroborated by 2+ sources
GJA1(6)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
Craniofacial dysostosis craniosynostosis 4
1 gene
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1 of 1 corroborated by 2+ sources
ERF(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
Creatine phosphokinase elevation Rippling muscle disease
1 gene
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1 of 1 corroborated by 2+ sources
CAV3(6)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 217 →
Crisponi syndrome Perching syndrome
1 gene
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1 of 1 corroborated by 2+ sources
KLHL7(5)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 331 →
Cronkhite-canada syndrome White sutton syndrome
1 gene
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GLI3(1)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 142 →
CTNNB1-related neurodevelopmental disorder and/or vitreoretinopathy Desmoid tumor
1 gene
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1 of 1 corroborated by 2+ sources
CTNNB1(3)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
Culler-jones syndrome White sutton syndrome
1 gene
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1 of 1 corroborated by 2+ sources
GLI2(3)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
cutis laxa, autosomal dominant 1 Dermatitis herpetiformis
1 gene
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1 of 1 corroborated by 2+ sources
ELN(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 300 →
D-bifunctional protein deficiency Fatty acid metabolism disorder
1 gene
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1 of 1 corroborated by 2+ sources
HSD17B4(5)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 99 →
Deafness-onychodystrophy syndrome Digitrenocerebral syndrome
1 gene
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1 of 1 corroborated by 2+ sources
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 90 →
Deafness-onychodystrophy syndrome Zimmermann-laband syndrome
1 gene
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1 of 1 corroborated by 2+ sources
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 90 →
Dend syndrome Diazoxide-resistant focal hyperinsulinism due to sulfonylurea receptor 1 deficiency
1 gene
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1 of 1 corroborated by 2+ sources
ABCC8(4)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
Dend syndrome hyperinsulinemic hypoglycemia, familial, 1
1 gene
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1 of 1 corroborated by 2+ sources
ABCC8(4)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
Dend syndrome Diazoxide-resistant focal hyperinsulinism due to kir6.2 deficiency
1 gene
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1 of 1 corroborated by 2+ sources
KCNJ11(4)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
Dend syndrome hyperinsulinemic hypoglycemia, familial, 2
1 gene
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1 of 1 corroborated by 2+ sources
KCNJ11(5)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
Dent disease Oculocerebrorenal syndrome
1 gene
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1 of 1 corroborated by 2+ sources
OCRL(7)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
Dent disease X-linked nephrolithiasis
1 gene
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1 of 1 corroborated by 2+ sources
CLCN5(7)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
Dentatorubral pallidoluysian atrophy X-linked hydrocephalus syndrome
1 gene
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1 of 1 corroborated by 2+ sources
ATN1(6)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
Dermatitis herpetiformis Refractory anemia
1 gene
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1 of 1 corroborated by 2+ sources
TNF(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 300 →

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.