Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
X-linked epilepsy with learning disability and behavior disorder syndrome X-linked epilepsy with variable learning disabilities and behavior disorders
1 gene
Show details
1 of 1 corroborated by 2+ sources
SYN1(4)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
X-linked epilepsy with learning disability and behavior disorder syndrome X-linked epilepsy-learning disabilities-behavior disorders syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
SYN1(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
X-linked epilepsy with variable learning disabilities and behavior disorders X-linked epilepsy-learning disabilities-behavior disorders syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
SYN1(5)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
X-linked lissencephaly X-linked spasticity-intellectual disability-epilepsy syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
ARX(5)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 259 →
X-linked severe congenital neutropenia X-linked thrombocytopenia
1 gene
Show details
1 of 1 corroborated by 2+ sources
WAS(4)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
X-linked spondyloepimetaphyseal dysplasia X-linked thoracic aortic aneurysm
1 gene
Show details
1 of 1 corroborated by 2+ sources
BGN(3)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Xerosis with immune and pulmonary dysfunction syndrome Xgip syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
DBR1(4)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Respiratory distress with surfactant metabolism deficiency SFTPC-related interstitial lung disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
SFTPC(4)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
retinal dystrophy-ataxia-pituitary hormone abnormality-hypogonadism syndrome Trichomegaly-retina pigmentary degeneration-dwarfism syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
PNPLA6(4)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 91 →
retinal vasculopathy with cerebral leukoencephalopathy and systemic manifestations Type i interferonopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
TREX1(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 150 →
Retinitis pigmentosa and erythrocytic microcytosis Sideroblastic anemia with b-cell immunodeficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
TRNT1(7)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Retinitis pigmentosa with choroidal involvement RPE65-related recessive retinopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
RPE65(5)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 241 →
Retinitis pigmentosa with choroidal involvement RPE65-related dominant retinopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
RPE65(5)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 241 →
Retinitis pigmentosa, x-linked, and sinorespiratory infections with or without deafness RPGR-related retinopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
RPGR(5)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 84 →
Revesz debuse syndrome Revesz syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
TINF2(6)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 130 →
Reynolds syndrome Rhizomelic skeletal dysplasia with or without pelger-huet anomaly
1 gene
Show details
1 of 1 corroborated by 2+ sources
LBR(4)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 280 →
Rhabdomyoma Sacroiliitis
1 gene
Show details
1 of 1 corroborated by 2+ sources
POMC(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 376 →
Richieri costa pereira syndrome Robin sequence with cleft mandible and limb anomalies
1 gene
Show details
1 of 1 corroborated by 2+ sources
EIF4A3(5)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Rickets, x-linked hypophosphatemic X-linked dominant hypophosphatemic rickets
1 gene
Show details
1 of 1 corroborated by 2+ sources
PHEX(3)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Rickets, x-linked hypophosphatemic X-linked hypophosphatemia
1 gene
Show details
1 of 1 corroborated by 2+ sources
PHEX(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Right bundle branch block Right cardiac ventricular dilatation
1 gene
Show details
BMPR2(1)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 339 →
RP1-related dominant retinopathy RP1-related recessive retinopathy
1 gene
Show details
RP1(1)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
RP2-related retinopathy X-linked retinitis pigmentosa
1 gene
Show details
1 of 1 corroborated by 2+ sources
RP2(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
RPE65-related dominant retinopathy RPE65-related recessive retinopathy
1 gene
Show details
RPE65(1)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 241 →
Rudiger syndrome Sweat gland neoplasm
1 gene
Show details
1 of 1 corroborated by 2+ sources
TP63(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 27 →

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.