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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Dosage-sensitive sex reversal X-linked adrenal hypoplasia congenita
1 gene
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1 of 1 corroborated by 2+ sources
NR0B1(4)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Drash syndrome wilms tumor 1
1 gene
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1 of 1 corroborated by 2+ sources
WT1(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 35 →
Dyserythropoietic anemia with abnormal platelets and neutropenia Thrombocytopenia with dyserythropoietic anemia
1 gene
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1 of 1 corroborated by 2+ sources
GATA1(7)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 125 →
Dyserythropoietic anemia with abnormal platelets and neutropenia GATA1-Related X-Linked Cytopenia
1 gene
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1 of 1 corroborated by 2+ sources
GATA1(5)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 125 →
Dysgnathia complex Retrognathia
1 gene
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PRRX1(1)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
dyskeratosis congenita, autosomal dominant 3 Revesz debuse syndrome
1 gene
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1 of 1 corroborated by 2+ sources
TINF2(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 130 →
dyskeratosis congenita, autosomal dominant 3 Revesz syndrome
1 gene
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1 of 1 corroborated by 2+ sources
TINF2(6)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 130 →
Dyskinesia with orofacial involvement Dyskinesia, familial, with facial myokymia
1 gene
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1 of 1 corroborated by 2+ sources
ADCY5(6)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Collagenopathy dysplasia of the proximal femoral epiphyses
1 gene
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1 of 1 corroborated by 2+ sources
COL2A1(3)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 11 →
Coxa plana dysplasia of the proximal femoral epiphyses
1 gene
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1 of 1 corroborated by 2+ sources
COL2A1(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 11 →
Czech dysplasia dysplasia of the proximal femoral epiphyses
1 gene
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1 of 1 corroborated by 2+ sources
COL2A1(4)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 11 →
dysplasia of the proximal femoral epiphyses Dysspondyloenchondromatosis
1 gene
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1 of 1 corroborated by 2+ sources
COL2A1(4)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 11 →
dysplasia of the proximal femoral epiphyses kniest dysplasia
1 gene
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COL2A1(1)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 11 →
Dysspondyloenchondromatosis kniest dysplasia
1 gene
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1 of 1 corroborated by 2+ sources
COL2A1(4)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 11 →
Dysspondyloenchondromatosis spondyloperipheral dysplasia
1 gene
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1 of 1 corroborated by 2+ sources
COL2A1(4)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 11 →
Dystransthyretinemic euthyroidal hyperthyroxinemia Senile systemic amyloidosis
1 gene
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1 of 1 corroborated by 2+ sources
TTR(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 182 →
Dystransthyretinemic euthyroidal hyperthyroxinemia Transthyretin amyloid cardiomyopathy
1 gene
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1 of 1 corroborated by 2+ sources
TTR(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 182 →
Dystransthyretinemic euthyroidal hyperthyroxinemia Wild-type transthyretin-related amyloidosis
1 gene
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1 of 1 corroborated by 2+ sources
TTR(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 182 →
Dystransthyretinemic euthyroidal hyperthyroxinemia obsolete hereditary ATTR amyloidosis
1 gene
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1 of 1 corroborated by 2+ sources
TTR(3)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 182 →
Dystrophinopathy progressive muscular dystrophy
1 gene
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1 of 1 corroborated by 2+ sources
DMD(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 213 →
Ear disease SLC26A2-related skeletal dysplasia
1 gene
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1 of 1 corroborated by 2+ sources
SLC26A2(3)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 183 →
Early onset progressive leukoencephalopathy-central nervous system calcification-hearing loss-visual impairment syndrome Early-onset progressive leukoencephalopathy-central nervous system calcification-deafness-visual impairment syndrome
1 gene
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1 of 1 corroborated by 2+ sources
KARS1(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Early-onset calcifying leukoencephalopathy-skeletal dysplasia leukoencephalopathy, diffuse hereditary, with spheroids 1
1 gene
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1 of 1 corroborated by 2+ sources
CSF1R(4)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Early-onset combined immunodeficiency with low ig due to dominant-negative ikaros mutation pancytopenia due to IKZF1 mutations
1 gene
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1 of 1 corroborated by 2+ sources
IKZF1(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Early-onset hypertension with severe exacerbation in pregnancy Pseudohypoaldosteronism
1 gene
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1 of 1 corroborated by 2+ sources
NR3C2(5)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.