Pathways column key: KEGG Reactome

Disease Term	Disease ID	Gene Symbol	Classification	References	Source	Pathways
BREAST CANCER	MONDO_0007254	CTNNA3	Unknown	29059683 38538606	GWAS catalog	Hippo signaling pathway Adherens junction Leukocyte transendothelial migration +5 more
		CTSF	Unknown	29059683	GWAS catalog	Lysosome Apoptosis MHC class II antigen presentation
		CTTNBP2	Unknown	38538606	GWAS catalog	—
		CUX1	Unknown	29059683 32139696	GWAS catalog	Signaling by cytosolic FGFR1 fusion mutants Signaling by FGFR1 in disease Intra-Golgi traffic
		CUX2	Unknown	32424353 37636041	GWAS catalog	—
		CYBRD1	Unknown	32887889	GWAS catalog	Mineral absorption Iron uptake and transport
		CYP19A1	Unknown	31757997	GWAS catalog	Steroid hormone biosynthesis Metabolic pathways Ovarian steroidogenesis +3 more
		CYP51A1	Unknown	37380357	GWAS catalog	Steroid biosynthesis Metabolic pathways Cholesterol biosynthesis +3 more
		DAB1	Unknown	38538606	GWAS catalog	Spinocerebellar ataxia Reelin signalling pathway
		DAP3	Unknown	29059683	GWAS catalog	Mitochondrial translation elongation Mitochondrial translation termination
		DCLK2	Unknown	40229280	GWAS catalog	—
		DCLRE1B	Unknown	23535729 25751625 29059683 32139696	GWAS catalog	Fanconi Anemia Pathway
		DGKQ	Unknown	37340002	GWAS catalog	Glycerolipid metabolism Glycerophospholipid metabolism Metabolic pathways +4 more
		DKK3	Unknown	34290314	GWAS catalog	—
		DLEU7	Unknown	29059683	GWAS catalog	—
		DLGAP2	Unknown	37851288	GWAS catalog	—
		DMD	Unknown	29059683	GWAS catalog	Cytoskeleton in muscle cells Hypertrophic cardiomyopathy Arrhythmogenic right ventricular cardiomyopathy +3 more
		DNAH11	Unknown	29059683 32139696	GWAS catalog	Motor proteins Amyotrophic lateral sclerosis Huntington disease +1 more
		DNAJC1	Unknown	23535729 25751625 29059683 32139696	GWAS catalog	Protein processing in endoplasmic reticulum
		DNAL4	Unknown	29059683	GWAS catalog	Motor proteins Amyotrophic lateral sclerosis Huntington disease +2 more
		DNM3	Unknown	29059683	GWAS catalog	Phospholipase D signaling pathway Endocytosis Synaptic vesicle cycle +6 more
		DNMT3A	Unknown	29059683	GWAS catalog	Cysteine and methionine metabolism Metabolic pathways Efferocytosis +3 more
		DOCK2	Unknown	40229280	GWAS catalog	Chemokine signaling pathway Nef and signal transduction Neutrophil degranulation +1 more
		DOCK3	Unknown	37380357	GWAS catalog	NTRK2 activates RAC1 Factors involved in megakaryocyte development and platelet production
		DOK6	Unknown	29059683	GWAS catalog	RET signaling
		DOT1L	Unknown	29059683	GWAS catalog	Lysine degradation Metabolic pathways Transcriptional misregulation in cancer +1 more
		DRAP1	Unknown	29059683	GWAS catalog	Signaling by NODAL Signaling by Activin
		DRG2	Unknown	29059683	GWAS catalog	—
		EBF1	Unknown	23535729 23535733 25751625 27117709 29059683 32139696 32887889 34290314 34594039 37340002 38538606 38741014	GWAS catalog	—
		EBF2	Unknown	29059683 32424353	GWAS catalog	—
		EBF4	Unknown	38538606	GWAS catalog	—
		EBLN1	Unknown	29059683	GWAS catalog	—
		ECE1	Unknown	34981446	GWAS catalog	Peptide ligand-binding receptors
		EFR3B	Unknown	29059683	GWAS catalog	—
		EGFR	Unknown	29059683 39753771	GWAS catalog	EGFR tyrosine kinase inhibitor resistance Endocrine resistance Virion - Hepatitis viruses +79 more
		EGR2	Unknown	29059683 32424353	GWAS catalog	C-type lectin receptor signaling pathway Hepatitis B Human T-cell leukemia virus 1 infection +3 more
		EIF5	Unknown	38501904	GWAS catalog	Ribosomal scanning and start codon recognition GTP hydrolysis and joining of the 60S ribosomal subunit
		EIF5A	Unknown	29059683	GWAS catalog	Hypusine synthesis from eIF5A-lysine
		ELL	Unknown	23535729 25751625 29059683 32139696	GWAS catalog	Viral life cycle - HIV-1 Formation of RNA Pol II elongation complex RNA Polymerase II Pre-transcription Events +4 more
		EMB	Unknown	29059683 32887889 34290314 37340002 38538606	GWAS catalog	Proton-coupled monocarboxylate transport
		EMID1	Unknown	23535729 25751625 29059683 32887889	GWAS catalog	—
		EMP2	Unknown	29059683	GWAS catalog	Focal adhesion
		EPB41L2	Unknown	38538606	GWAS catalog	Neurexins and neuroligins
		EPB41L3	Unknown	34290314	GWAS catalog	Neurexins and neuroligins
		EPB41L4A	Unknown	29059683	GWAS catalog	—
		EPSTI1	Unknown	29059683	GWAS catalog	—
		ERBB4	Unknown	22452962 32887889 34290314 34594039 38538606	GWAS catalog	MAPK signaling pathway ErbB signaling pathway Calcium signaling pathway +22 more
		ESRRG	Unknown	29059683 32139696	GWAS catalog	Nuclear Receptor transcription pathway
		ETV1	Unknown	37340002	GWAS catalog	Transcriptional misregulation in cancer
		EWSR1	Unknown	29059683	GWAS catalog	Transcriptional misregulation in cancer
BREAST CARCINOMA	EFO_0000305	CTNNA3	Unknown	29059683 38538606	GWAS catalog	Hippo signaling pathway Adherens junction Leukocyte transendothelial migration +5 more
		CTSF	Unknown	29059683	GWAS catalog	Lysosome Apoptosis MHC class II antigen presentation
		CTTNBP2	Unknown	38538606	GWAS catalog	—
		CUX1	Unknown	29059683 32139696	GWAS catalog	Signaling by cytosolic FGFR1 fusion mutants Signaling by FGFR1 in disease Intra-Golgi traffic
		CUX2	Unknown	32424353	GWAS catalog	—
		CYBRD1	Unknown	32887889	GWAS catalog	Mineral absorption Iron uptake and transport
		CYP19A1	Unknown	31757997	GWAS catalog	Steroid hormone biosynthesis Metabolic pathways Ovarian steroidogenesis +3 more
		DAB1	Unknown	38538606	GWAS catalog	Spinocerebellar ataxia Reelin signalling pathway
		DAP3	Unknown	29059683	GWAS catalog	Mitochondrial translation elongation Mitochondrial translation termination
		DCLK2	Unknown	40229280	GWAS catalog	—
		DCLRE1B	Unknown	23535729 25751625 29059683 32139696	GWAS catalog	Fanconi Anemia Pathway
		DGKQ	Unknown	37340002	GWAS catalog	Glycerolipid metabolism Glycerophospholipid metabolism Metabolic pathways +4 more
		DKK3	Unknown	34290314	GWAS catalog	—
		DLEU7	Unknown	29059683 35803233	GWAS catalog	—
		DLGAP2	Unknown	37851288	GWAS catalog	—
		DMD	Unknown	29059683	GWAS catalog	Cytoskeleton in muscle cells Hypertrophic cardiomyopathy Arrhythmogenic right ventricular cardiomyopathy +3 more
		DNAH11	Unknown	29059683 32139696	GWAS catalog	Motor proteins Amyotrophic lateral sclerosis Huntington disease +1 more
		DNAJC1	Unknown	23535729 25751625 27432226 29059683 32139696 32887889 35803233	GWAS catalog	Protein processing in endoplasmic reticulum
		DNAL4	Unknown	29059683	GWAS catalog	Motor proteins Amyotrophic lateral sclerosis Huntington disease +2 more
		DNM3	Unknown	29059683	GWAS catalog	Phospholipase D signaling pathway Endocytosis Synaptic vesicle cycle +6 more
		DNMT3A	Unknown	29059683	GWAS catalog	Cysteine and methionine metabolism Metabolic pathways Efferocytosis +3 more
		DOCK2	Unknown	40229280	GWAS catalog	Chemokine signaling pathway Nef and signal transduction Neutrophil degranulation +1 more
		DOCK3	Unknown	37340002	GWAS catalog	NTRK2 activates RAC1 Factors involved in megakaryocyte development and platelet production
		DOK6	Unknown	29059683	GWAS catalog	RET signaling
		DOT1L	Unknown	29059683	GWAS catalog	Lysine degradation Metabolic pathways Transcriptional misregulation in cancer +1 more
		DRAP1	Unknown	29059683	GWAS catalog	Signaling by NODAL Signaling by Activin
		DRG2	Unknown	29059683	GWAS catalog	—
		EBF1	Unknown	23535729 23535733 25751625 27117709 29058716 29059683 32139696 32887889 34290314 34594039 35414113 37340002 38538606 38741014	GWAS catalog	—
		EBF2	Unknown	29059683 32424353	GWAS catalog	—
		EBF4	Unknown	38538606	GWAS catalog	—
		EBLN1	Unknown	29059683	GWAS catalog	—
		ECE1	Unknown	34981446	GWAS catalog	Peptide ligand-binding receptors
		EFR3B	Unknown	29059683	GWAS catalog	—
		EGFR	Unknown	29059683 39753771	GWAS catalog	EGFR tyrosine kinase inhibitor resistance Endocrine resistance Virion - Hepatitis viruses +79 more
		EGR2	Unknown	29059683 32424353	GWAS catalog	C-type lectin receptor signaling pathway Hepatitis B Human T-cell leukemia virus 1 infection +3 more
		EIF5A	Unknown	29059683	GWAS catalog	Hypusine synthesis from eIF5A-lysine
		ELL	Unknown	23535729 25751625 29058716 29059683 32139696	GWAS catalog	Viral life cycle - HIV-1 Formation of RNA Pol II elongation complex RNA Polymerase II Pre-transcription Events +4 more
		EMB	Unknown	29059683 32424353 32887889 34290314 37340002 38538606	GWAS catalog	Proton-coupled monocarboxylate transport
		EMID1	Unknown	23535729 25751625 29059683 32887889	GWAS catalog	—
		EMP2	Unknown	29059683	GWAS catalog	Focal adhesion
		EPB41L2	Unknown	38538606	GWAS catalog	Neurexins and neuroligins
		EPB41L3	Unknown	34290314	GWAS catalog	Neurexins and neuroligins
		EPB41L4A	Unknown	29059683	GWAS catalog	—
		EPSTI1	Unknown	29059683	GWAS catalog	—
		ERBB4	Unknown	22452962 32887889 34290314 34594039 38538606	GWAS catalog	MAPK signaling pathway ErbB signaling pathway Calcium signaling pathway +22 more
		ESRRG	Unknown	29059683 32139696	GWAS catalog	Nuclear Receptor transcription pathway
		ETV1	Unknown	37340002	GWAS catalog	Transcriptional misregulation in cancer
		EWSR1	Unknown	29059683	GWAS catalog	Transcriptional misregulation in cancer
LUMINAL A BREAST CARCINOMA	MONDO_0021116	DOCK2	Unknown	38832928	GWAS catalog	Chemokine signaling pathway Nef and signal transduction Neutrophil degranulation +1 more

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Breast cancer

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