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Gene Gene information from NCBI Gene database.
Entrez ID 3164
Gene name Nuclear receptor subfamily 4 group A member 1
Gene symbol NR4A1
Synonyms (NCBI Gene)
GFRP1HMRN10NAK-1NGFIBNP10NUR77TR3
Chromosome 12
Chromosome location 12q13.13
Summary This gene encodes a member of the steroid-thyroid hormone-retinoid receptor superfamily. Expression is induced by phytohemagglutinin in human lymphocytes and by serum stimulation of arrested fibroblasts. The encoded protein acts as a nuclear transcription
miRNA miRNA information provided by mirtarbase database.
122 Show/Hide all (122)
miRTarBase ID miRNA Experiments Reference
MIRT018925 hsa-miR-335-5p Microarray 18185580
MIRT023110 hsa-miR-124-3p Microarray 18668037
MIRT026031 hsa-miR-196a-5p Sequencing 20371350
MIRT032110 hsa-let-7d-5p Sequencing 20371350
MIRT048853 hsa-miR-93-5p CLASH 23622248
Transcription factors Transcription factors information provided by TRRUST V2 database.
5
Transcription factor Regulation Reference
HDAC7 Unknown 15623513
HIF1A Activation 14729605
MEF2C Repression 18079734
PML Repression 12032831
SP1 Unknown 8961265
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
75 Show/Hide all (75)
GO ID Ontology Definition Evidence Reference
GO:0000785 Component Chromatin IEA
GO:0000785 Component Chromatin ISA
GO:0000785 Component Chromatin ISS
GO:0000978 Function RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
GO:0000981 Function DNA-binding transcription factor activity, RNA polymerase II-specific IBA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
139139 7980 ENSG00000123358
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P22736
Protein name Nuclear receptor subfamily 4immunitygroup A member 1 (Early response protein NAK1) (Nuclear hormone receptor NUR/77) (Nur77) (Orphan nuclear receptor HMR) (Orphan nuclear receptor TR3) (ST-59) (Testicular receptor 3)
Protein function Orphan nuclear receptor. Binds the NGFI-B response element (NBRE) 5'-AAAGGTCA-3' (PubMed:18690216, PubMed:8121493, PubMed:9315652). Binds 9-cis-retinoic acid outside of its ligand-binding (NR LBD) domain (PubMed:18690216). Participates in energy
PDB 2QW4 , 3V3E , 3V3Q , 4JGV , 4KZI , 4KZJ , 4KZM , 4RE8 , 4REE , 4REF , 4RZE , 4RZF , 4RZG , 4WHF , 4WHG , 6KZ5 , 6LC1 , 8WUY , 8Y7L
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00104 Hormone_recep 394 → 579 Ligand-binding domain of nuclear hormone receptor Domain
PF00105 zf-C4 265 → 334 Zinc finger, C4 type (two domains) Domain
Tissue specificity TISSUE SPECIFICITY: Fetal muscle and adult liver, brain and thyroid.
Sequence
MPCIQAQYGTPAPSPGPRDHLASDPLTPEFIKPTMDLASPEAAPAAPTALPSFSTFMDGY
TGEFDTFLYQLPGTVQPCSSASSSASSTSSSSATSPASASFKFEDFQVYGCYPGPLSGPV
DEALSSSGSDYYGSPCSAPSPSTPSFQPPQLSPWDGSFGHFSPSQTYEGLRAWTEQLPKA
SGPPQPPAFFSFSPPTGPSPSLAQSPLKLFPSQATHQLGEGESYSMPTAFPGLAPTSPHL
EGSGILDTPVTSTKARSGAPGGSEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAK
YICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVK
EVVRTDSLKGRRGRLPSKPKQPPDAS
PANLLTSLVRAHLDSGPSTAKLDYSKFQELVLPHFGKEDAGDVQQFYDLLSGSLEVIRKW
AEKIPGFAELSPADQDLLLESAFLELFILRLAYRSKPGEGKLIFCSGLVLHRLQCARGFG
DWIDSILAFSRSLHSLLVDVPAFACLSALVLITDRHGLQEPRRVEELQNRIASCLKEHVA
AVAGEPQPASCLSRLLGKLPELRTLCTQGLQRIFYLKLE
DLVPPPPIIDKIFMDTLPF
Sequence length 598
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
KEGG Pathway Reactome Pathway
MAPK signaling pathway AKT phosphorylates targets in the nucleus
PI3K-Akt signaling pathway Nuclear Receptor transcription pathway
Aldosterone synthesis and secretion Constitutive Signaling by AKT1 E17K in Cancer
Cortisol synthesis and secretion  
Cushing syndrome  
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
14
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Show/Hide Unknown Diseases (14)
Phenotype Name Clinical Significance Source Reference Evidence Score
DEPRESSIVE DISORDER, MAJOR — CTD 29175309
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ENDOMETRIOSIS — CTD, Disgenet
CTD, Disgenet
22138541
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ESSENTIAL TREMOR — GWAS catalog 34982113
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
INSULIN RESISTANCE — CTD 17785466
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
KIDNEY DISEASES — CTD, Disgenet
CTD, Disgenet
24722447
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Show/Hide Text Mining Associations (257)
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Abnormal involuntary movement Abnormal Involuntary Movement BEFREE 20010315
★★★★★
★☆☆☆☆
Found in Text Mining only
Acute monocytic leukemia Monocytic Leukemia BEFREE 23247046
★★★★★
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma of pancreas Pancreatic adenocarcinoma BEFREE 25275504
★★★★★
★☆☆☆☆
Found in Text Mining only
Adult Diffuse Large B-Cell Lymphoma B-cell Lymphoma BEFREE 24553175
★★★★★
★☆☆☆☆
Found in Text Mining only
Adult Medulloblastoma Medulloblastoma BEFREE 26840408
★★★★★
★☆☆☆☆
Found in Text Mining only
Alveolar rhabdomyosarcoma Alveolar Rhabdomyosarcoma BEFREE 27864345
★★★★★
★☆☆☆☆
Found in Text Mining only
Alzheimer Disease Alzheimer disease Pubtator 18248459 Associate
★★★★★
★☆☆☆☆
Found in Text Mining only
Amyloidosis Amyloidosis BEFREE 28627642
★★★★★
★☆☆☆☆
Found in Text Mining only
Anemia Hemolytic Hemolytic anemia Pubtator 34880407 Associate
★★★★★
★☆☆☆☆
Found in Text Mining only
Aortic Valve Insufficiency Aortic Valve Insufficiency BEFREE 29594945
★★★★★
★☆☆☆☆
Found in Text Mining only