LYZL1 (lysozyme like 1)

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Gene Gene information from NCBI Gene database.
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Entrez ID 84569
Gene name Lysozyme like 1
Gene symbol LYZL1
Synonyms (NCBI Gene)
KAAG648LYC2LYZD1PRO1278bA534G20.1
Chromosome 10
Chromosome location 10p12.1-p11.23
miRNA miRNA information provided by mirtarbase database.
1
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miRTarBase ID miRNA Experiments Reference
MIRT018179 hsa-miR-335-5p Microarray 18185580
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
5
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GO ID Ontology Definition Evidence Reference
GO:0003796 Function Lysozyme activity IBA
GO:0003796 Function Lysozyme activity IEA
GO:0005576 Component Extracellular region IEA
GO:0016787 Function Hydrolase activity IEA
GO:0016798 Function Hydrolase activity, acting on glycosyl bonds IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
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MIM HGNC e!Ensembl
HGNC N/A HGNC
Protein Protein information from UniProt database.
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UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q6UWQ5
Protein name Lysozyme-like protein 1 (EC 3.2.1.17)
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00062 Lys 20 → 145 C-type lysozyme/alpha-lactalbumin family Domain
Sequence 
MKAAGILTLIGCLVTGAESKIYTRCKLAKIFSRAGLDNYWGFSLGNWICMAYYESGYNTT
AQTVLDDGSIDYGIFQINSFAWCRRGKLKENNHCHVACSALITDDLTDAIICARKIVKET
QGMNYWQGWKKHCEGRDLSEWKKGCEVS
Sequence length 148
Interactions View interactions
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
12
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Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Show/Hide Unknown Diseases (12)
Phenotype Name Clinical Significance Source Reference Evidence Score
ASTROCYTOMA — GWAS catalog 36810956
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ATTENTION DEFICIT HYPERACTIVITY DISORDER — GWAS catalog 35764056
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
AUTISM SPECTRUM DISORDER — GWAS catalog 35764056
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
CANNABIS DEPENDENCE — GWAS catalog 21668797
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
COLOR VISION DISORDER — GWAS catalog 37359372
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Ovarian Neoplasms Ovarian neoplasm Pubtator 33370338 Associate
★★★★★
★☆☆☆☆
Found in Text Mining only
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SLC28A3 1 shared diseaseCannabis abuse 2 shared evidence sourcesGWAS catalog (Astrocytoma), GWAS catalog (Cannabis abuse) Related via 1 shared disease including Cannabis abuse — evidence mostly GWAS catalog. CADM2 1 shared diseaseCannabis abuse 2 shared evidence sourcesGWAS catalog (Astrocytoma), GWAS catalog (Cannabis abuse) Related via 1 shared disease including Cannabis abuse — evidence mostly GWAS catalog. VRK2 1 shared diseaseCannabis abuse 2 shared evidence sourcesGWAS catalog (Astrocytoma), GWAS catalog (Cannabis abuse) Related via 1 shared disease including Cannabis abuse — evidence mostly GWAS catalog. ZNF804A 1 shared diseaseCannabis abuse 2 shared evidence sourcesGWAS catalog (Astrocytoma), GWAS catalog (Cannabis abuse) Related via 1 shared disease including Cannabis abuse — evidence mostly GWAS catalog. TENM2 1 shared diseaseCannabis abuse 2 shared evidence sourcesGWAS catalog (Astrocytoma), GWAS catalog (Cannabis abuse) Related via 1 shared disease including Cannabis abuse — evidence mostly GWAS catalog.
Schizophrenia Linked via 5 of 5 related genesSLC28A3, CADM2, VRK2, ZNF804A, TENM2 Alzheimer disease Linked via 4 of 5 related genesSLC28A3, CADM2, ZNF804A, TENM2 Metabolic syndrome Linked via 4 of 5 related genesSLC28A3, CADM2, VRK2, TENM2 Obesity Linked via 4 of 5 related genesSLC28A3, CADM2, VRK2, ZNF804A Substance abuse Linked via 4 of 5 related genesSLC28A3, CADM2, VRK2, TENM2