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Gene Gene information from NCBI Gene database.
Entrez ID 2960
Gene name General transcription factor IIE subunit 1
Gene symbol GTF2E1
Synonyms (NCBI Gene)
FETF2E1TFIIE-A
Chromosome 3
Chromosome location 3q13.33
miRNA miRNA information provided by mirtarbase database.
510 Show/Hide all (510)
miRTarBase ID miRNA Experiments Reference
MIRT020098 hsa-miR-361-5p Sequencing 20371350
MIRT024145 hsa-miR-221-3p Sequencing 20371350
MIRT030375 hsa-miR-24-3p Microarray 19748357
MIRT051392 hsa-let-7f-5p CLASH 23622248
MIRT564149 hsa-miR-548c-3p PAR-CLIP 20371350
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
15 Show/Hide all (15)
GO ID Ontology Definition Evidence Reference
GO:0005515 Function Protein binding IPI 7667268, 7926747, 16547462, 18160537, 18354501, 28514442, 32296183, 33961781
GO:0005634 Component Nucleus IDA 9841876
GO:0005634 Component Nucleus IEA
GO:0005654 Component Nucleoplasm IDA
GO:0005654 Component Nucleoplasm TAS
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
189962 4650 ENSG00000153767
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P29083
Protein name General transcription factor IIE subunit 1 (General transcription factor IIE 56 kDa subunit) (Transcription initiation factor IIE subunit alpha) (TFIIE-alpha)
Protein function Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.
PDB 1VD4 , 2JTX , 2RNQ , 2RNR , 5GPY , 5IY6 , 5IY7 , 5IY8 , 5IY9 , 5IYA , 5IYB , 5IYC , 5IYD , 6O9L , 7EG9 , 7EGA , 7EGB , 7EGC , 7ENA , 7ENC , 7LBM , 7NVR , 7NVS , 7NVT , 7NVU , 7NVV , 7NVW , 7NVX , 7NVY , 7NVZ , 7NW0 , 8BVW , 8BYQ , 8GXQ , 8GXS , 8S51 , 8S52 , 8S54 , 8S55 , 8S5N , 8WAK , 8WAL , 8WAN , 8WAO , 8WAP , 8WAQ , 8WAR , 8WAS
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF02002 TFIIE_alpha 16 → 123 TFIIE alpha subunit Family
PF08271 TF_Zn_Ribbon 127 → 176 TFIIB zinc-binding Domain
PF11521 TFIIE-A_C 354 → 439 C-terminal general transcription factor TFIIE alpha Family
Sequence
MADPDVLTEVPAALKRLAKYVIRGFYGIEHALALDILIRNSCVKEEDMLELLKFDRKQLR
SVLNNLKGDKFIKCRMRVETAADGKTTRHNYYFINYRTLVNVVKYKLDHMRRRIETDERD
STN
RASFKCPVCSSTFTDLEANQLFDPMTGTFRCTFCHTEVEEDESAMPKKDARTLLARF
NEQIEPIYALLRETEDVNLAYEILEPEPTEIPALKQSKDHAATTAGAASLAGGHHREAWA
TKGPSYEDLYTQNVVINMDDQEDLHRASLEGKSAKERPIWLRESTVQGAYGSEDMKEGGI
DMDAFQEREEGHAGPDDNEEVMRALLIHEKKTSSAMAGSVGAAAPVTAANGSDSESETSE
SDDDSPPRPAAVAVHKREEDEEEDDEFEEVADDPIVMVAGRPFSYSEVSQRPELVAQMTP
EEKEAYIAMGQRMFEDLFE
Sequence length 439
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
KEGG Pathway Reactome Pathway
Basal transcription factors RNA Polymerase II Pre-transcription Events
Viral carcinogenesis RNA polymerase II transcribes snRNA genes
  RNA Polymerase II Promoter Escape
  RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
  RNA Polymerase II Transcription Initiation
  RNA Polymerase II Transcription Initiation And Promoter Clearance