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Gene Gene information from NCBI Gene database.
Entrez ID 2798
Gene name Gonadotropin releasing hormone receptor
Gene symbol GNRHR
Synonyms (NCBI Gene)
GNRHR1GRHRHH7LHRHRLRHR
Chromosome 4
Chromosome location 4q13.2
Summary This gene encodes the receptor for type 1 gonadotropin-releasing hormone. This receptor is a member of the seven-transmembrane, G-protein coupled receptor (GPCR) family. It is expressed on the surface of pituitary gonadotrope cells as well as lymphocytes,
SNPs SNP information provided by dbSNP.
22 Show/Hide all (22)
SNP ID Visualize variation Clinical significance Consequence
rs28933074 T>C Pathogenic Missense variant, coding sequence variant, synonymous variant
rs74452732 C>A,T Pathogenic Missense variant, coding sequence variant
rs104893836 T>C Pathogenic, pathogenic-likely-pathogenic Missense variant, coding sequence variant
rs104893837 C>T Pathogenic Missense variant, synonymous variant, coding sequence variant
rs104893838 G>A,C,T Pathogenic Missense variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
52 Show/Hide all (52)
miRTarBase ID miRNA Experiments Reference
MIRT022748 hsa-miR-124-3p Microarray 18668037
MIRT023851 hsa-miR-1-3p Microarray 18668037
MIRT029569 hsa-miR-26b-5p Microarray 19088304
MIRT1025594 hsa-miR-1305 CLIP-seq
MIRT1025595 hsa-miR-140-3p CLIP-seq
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
16 Show/Hide all (16)
GO ID Ontology Definition Evidence Reference
GO:0004930 Function G protein-coupled receptor activity IEA
GO:0004968 Function Gonadotropin-releasing hormone receptor activity IBA
GO:0004968 Function Gonadotropin-releasing hormone receptor activity IDA 8386108
GO:0005886 Component Plasma membrane IBA
GO:0005886 Component Plasma membrane IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
138850 4421 ENSG00000109163
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P30968
Protein name Gonadotropin-releasing hormone receptor (GnRH receptor) (GnRH-R)
Protein function Receptor for gonadotropin releasing hormone (GnRH) that mediates the action of GnRH to stimulate the secretion of the gonadotropic hormones luteinizing hormone (LH) and follicle-stimulating hormone (FSH). This receptor mediates its action by ass
PDB 7BR3
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00001 7tm_1 60 → 323 7 transmembrane receptor (rhodopsin family) Family
Tissue specificity TISSUE SPECIFICITY: Pituitary, ovary, testis, breast and prostate but not in liver and spleen.
Sequence
Sequence length 328
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
KEGG Pathway Reactome Pathway
Neuroactive ligand-receptor interaction Hormone ligand-binding receptors
Hormone signaling G alpha (q) signalling events
GnRH signaling pathway  
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
24
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Show/Hide Causal Diseases (10)
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Amenorrhea Likely pathogenic; Pathogenic rs104893837, rs104893840 RCV001849268
RCV001849269
★★★★★
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Delayed puberty Likely pathogenic; Pathogenic rs727505367 RCV000156945
★★★★★
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
GNRHR-related disorder Likely pathogenic; Pathogenic rs104893836 RCV003415714
★★★★★
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Gonadotropin deficiency Likely pathogenic; Pathogenic rs104893836 RCV000662016
★★★★★
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Hypogonadotropic hypogonadism Likely pathogenic; Pathogenic rs104893836, rs104893837, rs104893842 RCV003330392
RCV004782017
RCV005252686
★★★★★
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Show/Hide Unknown Diseases (14)
Phenotype Name Clinical Significance Source Reference Evidence Score
Adrenocortical carcinoma, hereditary Benign ClinVar —
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Cholangiocarcinoma Benign ClinVar —
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
HYPOGONADISM — CTD, Disgenet
CTD, Disgenet
15625238
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
HYPOPITUITARISM — Disgenet —
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
IDIOPATHIC GROWTH HORMONE DEFICIENCY — Disgenet —
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Show/Hide Text Mining Associations (127)
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Adenoma Adenoma BEFREE 11434667, 26397949, 8200967, 9177416, 9425394, 9724070, 9797855
★★★★★
★☆☆☆☆
Found in Text Mining only
Adrenal Cancer Adrenal Cancer CTD_human_DG 19131502
★★★★★
★☆☆☆☆
Found in Text Mining only
Adrenal Gland Neoplasms Adrenal neoplasia CTD_human_DG 19131502
★★★★★
★☆☆☆☆
Found in Text Mining only
Alzheimer Disease Alzheimer disease Pubtator 34128468 Associate
★★★★★
★☆☆☆☆
Found in Text Mining only
Amenorrhea Amenorrhea Pubtator 21247312, 29182666, 38521400 Associate
★★★★★
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Androgen Insensitivity Syndrome Androgen insensitivity syndrome Pubtator 34833359 Associate
★★★★★
★☆☆☆☆
Found in Text Mining only
Anxiety Anxiety Disorder BEFREE 30882966
★★★★★
★☆☆☆☆
Found in Text Mining only
Anxiety Anxiety Disorder HPO_DG
★★★★★
★☆☆☆☆
Found in Text Mining only
Anxiety Disorders Anxiety Disorder BEFREE 30882966
★★★★★
★☆☆☆☆
Found in Text Mining only
Atrial Fibrillation Atrial Fibrillation BEFREE 25706326
★★★★★
★☆☆☆☆
Found in Text Mining only