CCL3L3 (C-C motif chemokine ligand 3 like 3)

Download as csv Download as pdf

Log in to bookmark this gene

Bookmark This Gene

Title Project / Tag (optional) Note (optional)

Cancel Save

On this page

Gene miRNA Gene ontology Other IDs Pathways Associated diseases Related genes Diseases linked via similar genes

Gene

• Entrez ID: 414062
• Gene name: C-C motif chemokine ligand 3 like 3
• Gene symbol: CCL3L3
• Synonyms (NCBI Gene): 464.2, D17S1718, G0S19-2, LD78, LD78BETA, SCYA3L, SCYA3L1
• Chromosome: 17
• Chromosome location: 17q12
• Summary: This gene is one of several cytokine genes that are clustered on the q-arm of chromosome 17. Cytokines are a family of secreted proteins that function in inflammatory and immunoregulatory processes. The protein encoded by this gene binds to several chemok

miRNA

miRTarBase ID	miRNA	Experiments	Reference
MIRT024635	hsa-miR-215-5p	Microarray	19074876
MIRT871057	hsa-miR-3126-5p	CLIP-seq
MIRT871058	hsa-miR-4419a	CLIP-seq
MIRT871059	hsa-miR-4510	CLIP-seq
MIRT871060	hsa-miR-4747-5p	CLIP-seq

Gene ontology (GO) Show/Hide all (18)

GO ID	Ontology	Definition	Evidence	Reference
GO:0005125	Function	Cytokine activity	IEA
GO:0005515	Function	Protein binding	IPI	32296183
GO:0005576	Component	Extracellular region	IEA
GO:0005576	Component	Extracellular region	TAS
GO:0005615	Component	Extracellular space	IBA
GO:0005615	Component	Extracellular space	IEA
GO:0006935	Process	Chemotaxis	IEA
GO:0006954	Process	Inflammatory response	IBA
GO:0006954	Process	Inflammatory response	TAS	1694014
GO:0006955	Process	Immune response	IEA
GO:0008009	Function	Chemokine activity	IBA
GO:0008009	Function	Chemokine activity	IEA
GO:0008285	Process	Negative regulation of cell population proliferation	TAS	2271120
GO:0030335	Process	Positive regulation of cell migration	IBA
GO:0048020	Function	CCR chemokine receptor binding	IBA
GO:0060326	Process	Cell chemotaxis	IBA
GO:0061844	Process	Antimicrobial humoral immune response mediated by antimicrobial peptide	IBA
GO:0070098	Process	Chemokine-mediated signaling pathway	IBA

Other IDs

• MIM: 609468
• HGNC: 30554
• e!Ensembl: ENSG00000276085

Interactions View interactions

Pathways

KEGG Pathway	Reactome Pathway
Cytokine-cytokine receptor interaction	Chemokine receptors bind chemokines
Viral protein interaction with cytokine and cytokine receptor	Interleukin-10 signaling
Chemokine signaling pathway
Toll-like receptor signaling pathway
Chagas disease
Human cytomegalovirus infection
Rheumatoid arthritis
Lipid and atherosclerosis

Associated diseases

Evidence Score:

• ★☆☆☆☆  Gene-disease association found in Text Mining only
• ★★☆☆☆  Found in Text Mining and Unknown/Other Associations
• ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources
• ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants)
• ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)

Unknown / Other Associations
Phenotype Name	Clinical Significance	Source	Reference	Evidence Score
SKIN DISEASES	—	CTD	16835338	★★☆☆☆ Found in Text Mining + Unknown/Other Associations

Associations from Text Mining Show/Hide Text Mining Associations (13)
Disease Name	Disease (Merged)	Source	PMID	Relationship Type	Evidence Score
Arsenic Encephalopathy	Arsenic Encephalopathy	CTD_human_DG	16835338		★☆☆☆☆ Found in Text Mining only
Degenerative polyarthritis	Arthritis	BEFREE	26171692		★☆☆☆☆ Found in Text Mining only
Dermatologic disorders	Dermatologic Disorders	CTD_human_DG	16835338		★☆☆☆☆ Found in Text Mining only
Glioblastoma	Glioblastoma	BEFREE	30506802		★☆☆☆☆ Found in Text Mining only
Glioblastoma Multiforme	Glioblastoma	BEFREE	30506802		★☆☆☆☆ Found in Text Mining only
Gout	Gout	Pubtator	35116032	Associate	★☆☆☆☆ Found in Text Mining only
Leukemia, Myelocytic, Acute	Leukemia	BEFREE	2687328		★☆☆☆☆ Found in Text Mining only
Lupus Erythematosus Systemic	Systemic lupus erythematosus	Pubtator	34580371	Associate	★☆☆☆☆ Found in Text Mining only
Myeloid Leukemia, Chronic	Myeloid Leukemia	BEFREE	7492787		★☆☆☆☆ Found in Text Mining only
Neoplasms	Neoplasms	BEFREE	7669585		★☆☆☆☆ Found in Text Mining only
Papillon-Lefevre Disease	Papillon-Lefevre Disease	LHGDN	15728180		★☆☆☆☆ Found in Text Mining only
Scleroderma Systemic	Systemic sclerosis	Pubtator	39727004	Associate	★☆☆☆☆ Found in Text Mining only
Spondylitis Ankylosing	Ankylosing spondylitis	Pubtator	39727004	Associate	★☆☆☆☆ Found in Text Mining only

Related Genes

Sort by: Blended Diseases Pathways Evidence source

CCL3 10 shared pathwaysCytokine-cytokine receptor interaction, Viral protein interaction with cytokine and cytokine receptor, Chemokine signaling pathway, Toll-like receptor signaling pathway, Chagas disease, Human cytomegalovirus infection, Rheumatoid arthritis, Lipid and atherosclerosis, Chemokine receptors bind chemokines, Interleukin-10 signaling Related via 10 shared pathways including Cytokine-cytokine receptor interaction, Viral protein interaction with cytokine and cytokine receptor. CCL3L1 10 shared pathwaysCytokine-cytokine receptor interaction, Viral protein interaction with cytokine and cytokine receptor, Chemokine signaling pathway, Toll-like receptor signaling pathway, Chagas disease, Human cytomegalovirus infection, Rheumatoid arthritis, Lipid and atherosclerosis, Chemokine receptors bind chemokines, Interleukin-10 signaling Related via 10 shared pathways including Cytokine-cytokine receptor interaction, Viral protein interaction with cytokine and cytokine receptor. CCL4 1 shared diseaseSkin disease 7 shared pathwaysCytokine-cytokine receptor interaction, Viral protein interaction with cytokine and cytokine receptor, Chemokine signaling pathway, Toll-like receptor signaling pathway, Human cytomegalovirus infection, Chemokine receptors bind chemokines, Interleukin-10 signaling 1 shared evidence sourceCTD (Skin disease) Related via 7 shared pathways including Cytokine-cytokine receptor interaction, Viral protein interaction with cytokine and cytokine receptor — evidence mostly CTD. CCL4L1 7 shared pathwaysCytokine-cytokine receptor interaction, Viral protein interaction with cytokine and cytokine receptor, Chemokine signaling pathway, Toll-like receptor signaling pathway, Human cytomegalovirus infection, Chemokine receptors bind chemokines, Interleukin-10 signaling Related via 7 shared pathways including Cytokine-cytokine receptor interaction, Viral protein interaction with cytokine and cytokine receptor. CCL5 10 shared pathwaysCytokine-cytokine receptor interaction, Viral protein interaction with cytokine and cytokine receptor, Chemokine signaling pathway, Toll-like receptor signaling pathway, Chagas disease, Human cytomegalovirus infection, Rheumatoid arthritis, Lipid and atherosclerosis, Chemokine receptors bind chemokines, Interleukin-10 signaling Related via 10 shared pathways including Cytokine-cytokine receptor interaction, Viral protein interaction with cytokine and cytokine receptor.

Related Gene	Shared Diseases	Shared Disease Names	Shared Pathways	Shared Pathway Names	Shared Evidence Sources	Shared Evidence Names
CCL3	0	[]	10	["Cytokine-cytokine receptor interaction","Viral protein interaction with cytokine and cytokine receptor","Chemokine signaling pathway","Toll-like receptor signaling pathway","Chagas disease","Human cytomegalovirus infection","Rheumatoid arthritis","Lipid and atherosclerosis","Chemokine receptors bind chemokines","Interleukin-10 signaling"]	0	[]
CCL3L1	0	[]	10	["Cytokine-cytokine receptor interaction","Viral protein interaction with cytokine and cytokine receptor","Chemokine signaling pathway","Toll-like receptor signaling pathway","Chagas disease","Human cytomegalovirus infection","Rheumatoid arthritis","Lipid and atherosclerosis","Chemokine receptors bind chemokines","Interleukin-10 signaling"]	0	[]
CCL4	1	["Skin disease"]	7	["Cytokine-cytokine receptor interaction","Viral protein interaction with cytokine and cytokine receptor","Chemokine signaling pathway","Toll-like receptor signaling pathway","Human cytomegalovirus infection","Chemokine receptors bind chemokines","Interleukin-10 signaling"]	1	["CTD (Skin disease)"]
CCL4L1	0	[]	7	["Cytokine-cytokine receptor interaction","Viral protein interaction with cytokine and cytokine receptor","Chemokine signaling pathway","Toll-like receptor signaling pathway","Human cytomegalovirus infection","Chemokine receptors bind chemokines","Interleukin-10 signaling"]	0	[]
CCL5	0	[]	10	["Cytokine-cytokine receptor interaction","Viral protein interaction with cytokine and cytokine receptor","Chemokine signaling pathway","Toll-like receptor signaling pathway","Chagas disease","Human cytomegalovirus infection","Rheumatoid arthritis","Lipid and atherosclerosis","Chemokine receptors bind chemokines","Interleukin-10 signaling"]	0	[]

Diseases Linked via Similar Genes

Glomerulonephritis Linked via 3 of 5 related genesCCL3, CCL4, CCL5 Pulmonary fibrosis Linked via 3 of 5 related genesCCL3, CCL4, CCL5 Atherosclerosis Linked via 2 of 5 related genesCCL3, CCL4 Brain ischemia Linked via 2 of 5 related genesCCL3, CCL4 Color vision deficiency Linked via 2 of 5 related genesCCL3, CCL4

Disease	Linked Via (Gene Count)	Linked Via (Gene Names)
Glomerulonephritis	3	["CCL3","CCL4","CCL5"]
Pulmonary fibrosis	3	["CCL3","CCL4","CCL5"]
Atherosclerosis	2	["CCL3","CCL4"]
Brain ischemia	2	["CCL3","CCL4"]
Color vision deficiency	2	["CCL3","CCL4"]