ARPIN-AP3S2 (ARPIN-AP3S2 readthrough)

Download as csv Download as pdf
Log in to bookmark this gene

Bookmark This Gene

Gene Gene information from NCBI Gene database.
Download as csvDownload as pdf
Entrez ID 100526783
Gene name ARPIN-AP3S2 readthrough
Gene symbol ARPIN-AP3S2
Synonyms (NCBI Gene)
ARPINC15orf38C15orf38-AP3S2
Chromosome 15
Chromosome location 15q26.1
Summary This locus represents naturally occurring read-through transcription between the neighboring C15orf38 (chromosome 15 open reading frame 38) and AP3S2 (adaptor-related protein complex 3, sigma 2 subunit) genes. The read-through transcript encodes a fusion
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
Download as csvDownload as pdf
MIM HGNC e!Ensembl
HGNC N/A HGNC
Interactions View interactions
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
8
Download as csvDownload as pdf
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Show/Hide Unknown Diseases (8)
Phenotype Name Clinical Significance Source Reference Evidence Score
DIABETES MELLITUS — GWAS catalog 39024449
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
DIABETIC EYE DISEASE — GWAS catalog 39024449
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
DIABETIC NEUROPATHY — GWAS catalog 39024449
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
DIABETIC RETINOPATHY — GWAS catalog 39024449
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
OLIGODENDROGLIOMA — GWAS catalog 36810956
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Show/Hide Text Mining Associations (12)
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Breast Carcinoma Breast Carcinoma BEFREE 26648569
★★★★★
★☆☆☆☆
Found in Text Mining only
Breast Neoplasms Breast neoplasm Pubtator 26648569, 36921992 Associate
★★★★★
★☆☆☆☆
Found in Text Mining only
Breast Neoplasms Breast neoplasm Pubtator 26867158 Inhibit
★★★★★
★☆☆☆☆
Found in Text Mining only
Diabetes Mellitus, Non-Insulin-Dependent Diabetes Mellitus GWASCAT_DG 30595370, 30718926
★★★★★
★☆☆☆☆
Found in Text Mining only
Lymphatic Metastasis Lymphatic metastasis Pubtator 26648569, 28293092 Inhibit
★★★★★
★☆☆☆☆
Found in Text Mining only
Malignant neoplasm of breast Breast Cancer BEFREE 26648569
★★★★★
★☆☆☆☆
Found in Text Mining only
Malignant neoplasm of stomach Stomach Neoplasms BEFREE 28293092
★★★★★
★☆☆☆☆
Found in Text Mining only
Malignant Neoplasms Malignant Neoplasm BEFREE 26648569
★★★★★
★☆☆☆☆
Found in Text Mining only
Neoplasms Neoplasms BEFREE 26648569
★★★★★
★☆☆☆☆
Found in Text Mining only
Obesity Obesity Pubtator 29752338 Associate
★★★★★
★☆☆☆☆
Found in Text Mining only
Sort by:
KLHL42 3 shared diseasesDiabetes mellitus, Diabetic eye disease, Diabetic retinopathy 3 shared evidence sourcesGWAS catalog (Diabetes mellitus), GWAS catalog (Diabetic eye disease), GWAS catalog (Diabetic retinopathy) Related via 3 shared diseases including Diabetes mellitus, Diabetic eye disease — evidence mostly GWAS catalog. NKX6-3 3 shared diseasesDiabetes mellitus, Diabetic eye disease, Diabetic neuropathy 3 shared evidence sourcesGWAS catalog (Diabetes mellitus), GWAS catalog (Diabetic eye disease), GWAS catalog (Diabetic neuropathy) Related via 3 shared diseases including Diabetes mellitus, Diabetic eye disease — evidence mostly GWAS catalog. CDC123 4 shared diseasesDiabetes mellitus, Diabetic eye disease, Diabetic neuropathy, Diabetic retinopathy 4 shared evidence sourcesGWAS catalog (Diabetes mellitus), GWAS catalog (Diabetic eye disease), GWAS catalog (Diabetic neuropathy), GWAS catalog (Diabetic retinopathy) Related via 4 shared diseases including Diabetes mellitus, Diabetic eye disease — evidence mostly GWAS catalog. GPSM1 4 shared diseasesDiabetes mellitus, Diabetic eye disease, Diabetic neuropathy, Diabetic retinopathy 4 shared evidence sourcesGWAS catalog (Diabetes mellitus), GWAS catalog (Diabetic eye disease), GWAS catalog (Diabetic neuropathy), GWAS catalog (Diabetic retinopathy) Related via 4 shared diseases including Diabetes mellitus, Diabetic eye disease — evidence mostly GWAS catalog. CENPW 3 shared diseasesDiabetes mellitus, Diabetic eye disease, Diabetic retinopathy 3 shared evidence sourcesGWAS catalog (Diabetes mellitus), GWAS catalog (Diabetic eye disease), GWAS catalog (Diabetic retinopathy) Related via 3 shared diseases including Diabetes mellitus, Diabetic eye disease — evidence mostly GWAS catalog.
Coronary artery disease Linked via 3 of 5 related genesCDC123, GPSM1, CENPW Myocardial infarction Linked via 3 of 5 related genesCDC123, GPSM1, CENPW Alzheimer disease Linked via 1 of 5 related genesKLHL42 Insomnia Linked via 1 of 5 related genesNKX6-3 Obstructive pulmonary disease Linked via 1 of 5 related genesCDC123