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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Cataract Transaldolase deficiency
1 gene
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1 of 1 corroborated by 2+ sources
TALDO1(6)
0.005 1.000 1.31e-2 1.46e-2 ✓ sig. —
Cataract Uterine benign neoplasm
1 gene
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BET1L(1)
0.005 1.000 1.31e-2 1.46e-2 ✓ sig. —
Cataract Congenital cataract severe neonatal hepatopathy developmental delay syndrome
1 gene
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1 of 1 corroborated by 2+ sources
CYP51A1(2)
0.005 1.000 1.31e-2 1.46e-2 ✓ sig. Cluster 43 →
Baralle-macken syndrome Cataract
1 gene
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1 of 1 corroborated by 2+ sources
COPB1(4)
0.005 1.000 1.31e-2 1.46e-2 ✓ sig. —
Cataract Prolidase deficiency
1 gene
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1 of 1 corroborated by 2+ sources
PEPD(3)
0.005 1.000 1.31e-2 1.46e-2 ✓ sig. —
Cataract Proximal renal tubular acidosis
1 gene
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1 of 1 corroborated by 2+ sources
SLC4A4(4)
0.005 1.000 1.31e-2 1.46e-2 ✓ sig. —
Cataract nance-horan syndrome
1 gene
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1 of 1 corroborated by 2+ sources
NHS(5)
0.005 1.000 1.31e-2 1.46e-2 ✓ sig. Cluster 43 →
Cataract Hyperbiliverdinemia
1 gene
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1 of 1 corroborated by 2+ sources
BLVRA(7)
0.005 1.000 1.31e-2 1.46e-2 ✓ sig. —
Cataract Cataract-growth hormone deficiency-skeletal dysplasia syndrome
1 gene
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1 of 1 corroborated by 2+ sources
IARS2(5)
0.005 1.000 1.31e-2 1.46e-2 ✓ sig. —
Cataract Cataract-microcornea-metabolic syndrome
1 gene
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1 of 1 corroborated by 2+ sources
0.005 1.000 1.31e-2 1.46e-2 ✓ sig. —
anterior segment dysgenesis 8 Cataract
1 gene
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1 of 1 corroborated by 2+ sources
CPAMD8(2)
0.005 1.000 1.31e-2 1.46e-2 ✓ sig. —
Cataract Corneal injury
1 gene
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ALDH3A1(1)
0.005 1.000 1.31e-2 1.46e-2 ✓ sig. —
Cataract methylmalonic aciduria, cblb type
1 gene
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1 of 1 corroborated by 2+ sources
MMAB(2)
0.005 1.000 1.31e-2 1.46e-2 ✓ sig. —
Central hypoventilation syndrome Hirschsprung disease
1 gene
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1 of 1 corroborated by 2+ sources
PHOX2B(6)
0.014 0.333 1.30e-2 1.45e-2 ✓ sig. Cluster 387 →
Hirschsprung disease Hyperglycinuria
1 gene
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1 of 1 corroborated by 2+ sources
SLC6A20(2)
0.014 0.333 1.30e-2 1.45e-2 ✓ sig. —
Arginine vasopressin resistance Seasonal allergic rhinitis
1 gene
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1 of 1 corroborated by 2+ sources
AQP2(2)
0.010 0.500 1.29e-2 1.45e-2 ✓ sig. —
Adenoid cystic carcinoma Diaphragm disease
1 gene
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1 of 1 corroborated by 2+ sources
WNT5B(2)
0.010 0.500 1.29e-2 1.45e-2 ✓ sig. —
Diaphragm disease Preeclampsia
1 gene
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WNT3A(1)
0.010 0.500 1.27e-2 1.42e-2 ✓ sig. —
Bladder calculus Oculopharyngodistal myopathy
1 gene
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1 of 1 corroborated by 2+ sources
GIPC1(5)
0.023 0.200 1.26e-2 1.41e-2 ✓ sig. —
Glomerulonephritis Omodysplasia
1 gene
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1 of 1 corroborated by 2+ sources
GPC6(6)
0.010 0.500 1.26e-2 1.40e-2 ✓ sig. —
Brody myopathy Glomerulonephritis
1 gene
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1 of 1 corroborated by 2+ sources
RABEP2(2)
0.010 0.500 1.26e-2 1.40e-2 ✓ sig. —
Celiac disease immunodeficiency 109 with lymphoproliferation
1 gene
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1 of 1 corroborated by 2+ sources
TNFRSF9(3)
0.005 1.000 1.25e-2 1.40e-2 ✓ sig. —
Celiac disease isolated sulfite oxidase deficiency
1 gene
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1 of 1 corroborated by 2+ sources
SUOX(2)
0.005 1.000 1.25e-2 1.40e-2 ✓ sig. Cluster 39 →
Celiac disease phosphoenolpyruvate carboxykinase deficiency, cytosolic
1 gene
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1 of 1 corroborated by 2+ sources
PCK1(3)
0.005 1.000 1.25e-2 1.40e-2 ✓ sig. —
Beta-ureidopropionase deficiency Celiac disease
1 gene
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1 of 1 corroborated by 2+ sources
UPB1(6)
0.005 1.000 1.25e-2 1.40e-2 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.