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Gene Gene information from NCBI Gene database.
Entrez ID 89780
Gene name Wnt family member 3A
Gene symbol WNT3A
Synonyms (NCBI Gene)
-
Chromosome 1
Chromosome location 1q42.13
Summary The WNT gene family consists of structurally related genes which encode secreted signaling proteins. These proteins have been implicated in oncogenesis and in several developmental processes, including regulation of cell fate and patterning during embryog
miRNA miRNA information provided by mirtarbase database.
165 Show/Hide all (165)
miRTarBase ID miRNA Experiments Reference
MIRT000282 hsa-miR-15a-5p Luciferase reporter assay 18931683
MIRT003430 hsa-miR-16-5p Luciferase reporter assay 18931683
MIRT003430 hsa-miR-16-5p Review 20130964
MIRT000282 hsa-miR-15a-5p Luciferase reporter assayqRT-PCR 21106054
MIRT000282 hsa-miR-15a-5p Luciferase reporter assayqRT-PCR 21106054
Transcription factors Transcription factors information provided by TRRUST V2 database.
1
Transcription factor Regulation Reference
FOXQ1 Activation 20145154
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
128 Show/Hide all (128)
GO ID Ontology Definition Evidence Reference
GO:0001649 Process Osteoblast differentiation IEA
GO:0001701 Process In utero embryonic development IEA
GO:0001756 Process Somitogenesis IEA
GO:0001819 Process Positive regulation of cytokine production IEA
GO:0001947 Process Heart looping IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
606359 15983 ENSG00000154342
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P56704
Protein name Protein Wnt-3a
Protein function Ligand for members of the frizzled family of seven transmembrane receptors (Probable). Functions in the canonical Wnt signaling pathway that results in activation of transcription factors of the TCF/LEF family (PubMed:20093360, PubMed:21244856,
PDB 7DRT , 7URD , 7URE , 8TZR
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00110 wnt 44 → 352 wnt family Family
Tissue specificity TISSUE SPECIFICITY: Moderately expressed in placenta and at low levels in adult lung, spleen, and prostate. {ECO:0000269|PubMed:11414706}.
Sequence
Sequence length 352
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
KEGG Pathway Reactome Pathway
mTOR signaling pathway TCF dependent signaling in response to WNT
Wnt signaling pathway WNT ligand biogenesis and trafficking
Hippo signaling pathway Disassembly of the destruction complex and recruitment of AXIN to the membrane
Signaling pathways regulating pluripotency of stem cells Regulation of FZD by ubiquitination
Melanogenesis RNF mutants show enhanced WNT signaling and proliferation
Cushing syndrome  
Alzheimer disease  
Pathways of neurodegeneration - multiple diseases  
Human papillomavirus infection  
Pathways in cancer  
Proteoglycans in cancer  
MicroRNAs in cancer  
Basal cell carcinoma  
Breast cancer  
Hepatocellular carcinoma  
Gastric cancer  
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
9
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Show/Hide Unknown Diseases (9)
Phenotype Name Clinical Significance Source Reference Evidence Score
CARDIOVASCULAR DISEASE — GWAS catalog 30595370
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
DIAPHRAGM DISEASE — GWAS catalog 39024449
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Familial cancer of breast Uncertain significance ClinVar —
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
HEPATOCELLULAR CARCINOMA — GWAS catalog 34902334
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
HYPERTENSION — GWAS catalog 37947095, 38965376, 39789286
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Show/Hide Text Mining Associations (155)
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Acute lymphocytic leukemia Lymphocytic Leukemia BEFREE 17156404, 19035298
★★★★★
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma of lung (disorder) Lung adenocarcinoma BEFREE 27806326, 28900490
★★★★★
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma of rectum Adenocarcinoma Of Rectum BEFREE 30637920
★★★★★
★☆☆☆☆
Found in Text Mining only
Adenomatous Polyposis Coli Multiple polyposis syndrome BEFREE 26941395
★★★★★
★☆☆☆☆
Found in Text Mining only
Amyotrophic Lateral Sclerosis Amyotrophic Lateral Sclerosis BEFREE 22426476
★★★★★
★☆☆☆☆
Found in Text Mining only
Anaplasia Anaplasia BEFREE 20179324, 25024173
★★★★★
★☆☆☆☆
Found in Text Mining only
Arteriosclerosis Arteriosclerosis BEFREE 30548452
★★★★★
★☆☆☆☆
Found in Text Mining only
Arthritis Arthritis BEFREE 23954131
★★★★★
★☆☆☆☆
Found in Text Mining only
Asthma Asthma Pubtator 31683769 Associate
★★★★★
★☆☆☆☆
Found in Text Mining only
Astrocytoma Astrocytoma Pubtator 26708597 Stimulate
★★★★★
★☆☆☆☆
Found in Text Mining only